RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
VSNL1-203ENST00000406397 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
VSNL1-203ENST00000406397 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
VSNL1-203ENST00000406397 M0R2T5 61 aa2.41□□□□□ -2.02
VSNL1-203ENST00000406397 MT1HP80294 61 aa2.41□□□□□ -2.02
VSNL1-203ENST00000406397 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
VSNL1-203ENST00000406397 TNP1P09430 55 aa2.33□□□□□ -2.04
VSNL1-203ENST00000406397 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
VSNL1-203ENST00000406397 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
VSNL1-203ENST00000406397 MT2AP02795 61 aa2.29□□□□□ -2.04
VSNL1-203ENST00000406397 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
VSNL1-203ENST00000406397 MT1FP04733 61 aa2.28□□□□□ -2.04
VSNL1-203ENST00000406397 KRTAP10-7P60409 375 aaPredicted RBP2.26□□□□□ -2.05
VSNL1-203ENST00000406397 LCE3CQ5T5A8 94 aa2.25□□□□□ -2.05
VSNL1-203ENST00000406397 FSIP2Q5CZC0 6907 aa2.24□□□□□ -2.05
VSNL1-203ENST00000406397 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
VSNL1-203ENST00000406397 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
VSNL1-203ENST00000406397 USH2AO75445 5202 aa2.22□□□□□ -2.05
VSNL1-203ENST00000406397 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
VSNL1-203ENST00000406397 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
VSNL1-203ENST00000406397 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
VSNL1-203ENST00000406397 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
VSNL1-203ENST00000406397 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
VSNL1-203ENST00000406397 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
VSNL1-203ENST00000406397 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
VSNL1-203ENST00000406397 KRTAP10-12P60413 245 aa2.14□□□□□ -2.07
VSNL1-203ENST00000406397 MT1BP07438 61 aa2.13□□□□□ -2.07
VSNL1-203ENST00000406397 KRTAP19-8Q3LI54 63 aa2.12□□□□□ -2.07
VSNL1-203ENST00000406397 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
VSNL1-203ENST00000406397 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
VSNL1-203ENST00000406397 SYNE2Q8WXH0 6885 aaKnown RBP2.11□□□□□ -2.07
VSNL1-203ENST00000406397 LCE3EQ5T5B0 92 aa2.1□□□□□ -2.07
VSNL1-203ENST00000406397 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
VSNL1-203ENST00000406397 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
VSNL1-203ENST00000406397 LCE1EQ5T753 118 aa2.04□□□□□ -2.08
VSNL1-203ENST00000406397 MT1XP80297 61 aa2.04□□□□□ -2.08
VSNL1-203ENST00000406397 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
VSNL1-203ENST00000406397 KRTAP10-5P60370 271 aa2.04□□□□□ -2.08
VSNL1-203ENST00000406397 KMT2DO14686 5537 aa2.01□□□□□ -2.09
VSNL1-203ENST00000406397 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
VSNL1-203ENST00000406397 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
VSNL1-203ENST00000406397 MT3P25713 68 aa1.97□□□□□ -2.09
VSNL1-203ENST00000406397 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
VSNL1-203ENST00000406397 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
VSNL1-203ENST00000406397 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
VSNL1-203ENST00000406397 KRTAP12-4P60329 112 aa1.86□□□□□ -2.11
VSNL1-203ENST00000406397 MDN1Q9NU22 5596 aa1.85□□□□□ -2.11
VSNL1-203ENST00000406397 SPRR2FQ96RM1 72 aa1.85□□□□□ -2.11
VSNL1-203ENST00000406397 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
VSNL1-203ENST00000406397 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
VSNL1-203ENST00000406397 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
VSNL1-203ENST00000406397 MT1EP04732 61 aa1.79□□□□□ -2.12
VSNL1-203ENST00000406397 SPRR2EP22531 72 aa1.77□□□□□ -2.13
VSNL1-203ENST00000406397 SPRR2BP35325 72 aa1.77□□□□□ -2.13
VSNL1-203ENST00000406397 SPRR2AP35326 72 aa1.77□□□□□ -2.13
VSNL1-203ENST00000406397 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
VSNL1-203ENST00000406397 MT1LQ93083 61 aa1.74□□□□□ -2.13
VSNL1-203ENST00000406397 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
VSNL1-203ENST00000406397 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
VSNL1-203ENST00000406397 SPRR2DP22532 72 aa1.71□□□□□ -2.14
VSNL1-203ENST00000406397 MT1GP13640 62 aa1.7□□□□□ -2.14
VSNL1-203ENST00000406397 PRM1P04553 51 aa1.69□□□□□ -2.14
VSNL1-203ENST00000406397 MT1MQ8N339 61 aa1.69□□□□□ -2.14
VSNL1-203ENST00000406397 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
VSNL1-203ENST00000406397 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
VSNL1-203ENST00000406397 MT1AP04731 61 aa1.55□□□□□ -2.16
VSNL1-203ENST00000406397 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.17
VSNL1-203ENST00000406397 MT4P47944 62 aa1.51□□□□□ -2.17
VSNL1-203ENST00000406397 KRTAP6-1Q3LI64 71 aa1.49□□□□□ -2.17
VSNL1-203ENST00000406397 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
VSNL1-203ENST00000406397 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
VSNL1-203ENST00000406397 LCE1CQ5T751 118 aa1.28□□□□□ -2.2
VSNL1-203ENST00000406397 LCE1BQ5T7P3 118 aa1.28□□□□□ -2.2
VSNL1-203ENST00000406397 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
VSNL1-203ENST00000406397 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
VSNL1-203ENST00000406397 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
VSNL1-203ENST00000406397 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms