RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.54
KDSR-202ENST00000406396 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
KDSR-202ENST00000406396 MT1MQ8N339 61 aa5.39□□□□□ -1.55
KDSR-202ENST00000406396 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
KDSR-202ENST00000406396 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
KDSR-202ENST00000406396 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
KDSR-202ENST00000406396 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
KDSR-202ENST00000406396 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
KDSR-202ENST00000406396 MT3P25713 68 aa5.28□□□□□ -1.56
KDSR-202ENST00000406396 PRM1P04553 51 aa5.27□□□□□ -1.57
KDSR-202ENST00000406396 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
KDSR-202ENST00000406396 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
KDSR-202ENST00000406396 MT4P47944 62 aa5.19□□□□□ -1.58
KDSR-202ENST00000406396 KRTAP19-7Q3SYF9 63 aa5.17□□□□□ -1.58
KDSR-202ENST00000406396 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
KDSR-202ENST00000406396 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
KDSR-202ENST00000406396 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
KDSR-202ENST00000406396 MT1AP04731 61 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
KDSR-202ENST00000406396 MUC2Q02817 5179 aa5□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
KDSR-202ENST00000406396 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.93□□□□□ -1.62
KDSR-202ENST00000406396 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
KDSR-202ENST00000406396 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
KDSR-202ENST00000406396 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
KDSR-202ENST00000406396 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
KDSR-202ENST00000406396 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
KDSR-202ENST00000406396 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.65
KDSR-202ENST00000406396 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
KDSR-202ENST00000406396 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
KDSR-202ENST00000406396 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
KDSR-202ENST00000406396 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
KDSR-202ENST00000406396 USH2AO75445 5202 aa4.55□□□□□ -1.68
KDSR-202ENST00000406396 KRTAP5-9P26371 169 aa4.4□□□□□ -1.71
KDSR-202ENST00000406396 KMT2DO14686 5537 aa4.39□□□□□ -1.71
KDSR-202ENST00000406396 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
KDSR-202ENST00000406396 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
KDSR-202ENST00000406396 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
KDSR-202ENST00000406396 NEBP20929 6669 aa4.24□□□□□ -1.73
KDSR-202ENST00000406396 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
KDSR-202ENST00000406396 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
KDSR-202ENST00000406396 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
KDSR-202ENST00000406396 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
KDSR-202ENST00000406396 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
KDSR-202ENST00000406396 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
KDSR-202ENST00000406396 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
KDSR-202ENST00000406396 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
KDSR-202ENST00000406396 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
KDSR-202ENST00000406396 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
KDSR-202ENST00000406396 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
KDSR-202ENST00000406396 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
KDSR-202ENST00000406396 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
KDSR-202ENST00000406396 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
KDSR-202ENST00000406396 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
KDSR-202ENST00000406396 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
KDSR-202ENST00000406396 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
KDSR-202ENST00000406396 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
KDSR-202ENST00000406396 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
KDSR-202ENST00000406396 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
KDSR-202ENST00000406396 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
KDSR-202ENST00000406396 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
KDSR-202ENST00000406396 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
KDSR-202ENST00000406396 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
KDSR-202ENST00000406396 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
KDSR-202ENST00000406396 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
KDSR-202ENST00000406396 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
KDSR-202ENST00000406396 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
KDSR-202ENST00000406396 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
KDSR-202ENST00000406396 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
KDSR-202ENST00000406396 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
KDSR-202ENST00000406396 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
KDSR-202ENST00000406396 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms