RNA–Protein interactions for RNA: ENST00000405666.5

ESRRA-202, Transcript of estrogen related receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ESRRA, Length 2,283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-202ENST00000405666 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
ESRRA-202ENST00000405666 KRTAP9-6A8MVA2 160 aa7.05□□□□□ -1.28
ESRRA-202ENST00000405666 MUC12Q9UKN1 5478 aa7.01□□□□□ -1.29
ESRRA-202ENST00000405666 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
ESRRA-202ENST00000405666 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
ESRRA-202ENST00000405666 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
ESRRA-202ENST00000405666 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
ESRRA-202ENST00000405666 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
ESRRA-202ENST00000405666 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
ESRRA-202ENST00000405666 MT1GP13640 62 aa6.9□□□□□ -1.31
ESRRA-202ENST00000405666 MT1MQ8N339 61 aa6.87□□□□□ -1.31
ESRRA-202ENST00000405666 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
ESRRA-202ENST00000405666 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
ESRRA-202ENST00000405666 SYNE2Q8WXH0 6885 aaKnown RBP6.78□□□□□ -1.32
ESRRA-202ENST00000405666 KRTAP5-9P26371 169 aa6.7□□□□□ -1.34
ESRRA-202ENST00000405666 LOC100996750A0A140TA64 210 aa6.68□□□□□ -1.34
ESRRA-202ENST00000405666 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
ESRRA-202ENST00000405666 MDN1Q9NU22 5596 aa6.59□□□□□ -1.35
ESRRA-202ENST00000405666 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
ESRRA-202ENST00000405666 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
ESRRA-202ENST00000405666 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
ESRRA-202ENST00000405666 SPRR2EP22531 72 aa6.43□□□□□ -1.38
ESRRA-202ENST00000405666 SPRR2BP35325 72 aa6.43□□□□□ -1.38
ESRRA-202ENST00000405666 SPRR2AP35326 72 aa6.43□□□□□ -1.38
ESRRA-202ENST00000405666 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
ESRRA-202ENST00000405666 KRTAP12-4P60329 112 aa6.25□□□□□ -1.41
ESRRA-202ENST00000405666 SPRR2DP22532 72 aa6.18□□□□□ -1.42
ESRRA-202ENST00000405666 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
ESRRA-202ENST00000405666 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
ESRRA-202ENST00000405666 MT1AP04731 61 aa6.11□□□□□ -1.43
ESRRA-202ENST00000405666 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
ESRRA-202ENST00000405666 LCE3BQ5TA77 95 aa6.02□□□□□ -1.44
ESRRA-202ENST00000405666 NEBP20929 6669 aa5.96□□□□□ -1.45
ESRRA-202ENST00000405666 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
ESRRA-202ENST00000405666 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
ESRRA-202ENST00000405666 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
ESRRA-202ENST00000405666 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
ESRRA-202ENST00000405666 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
ESRRA-202ENST00000405666 PRM1P04553 51 aa5.65□□□□□ -1.5
ESRRA-202ENST00000405666 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
ESRRA-202ENST00000405666 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
ESRRA-202ENST00000405666 MT3P25713 68 aa5.5□□□□□ -1.53
ESRRA-202ENST00000405666 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.53
ESRRA-202ENST00000405666 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
ESRRA-202ENST00000405666 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
ESRRA-202ENST00000405666 MT4P47944 62 aa5.4□□□□□ -1.55
ESRRA-202ENST00000405666 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
ESRRA-202ENST00000405666 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
ESRRA-202ENST00000405666 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
ESRRA-202ENST00000405666 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
ESRRA-202ENST00000405666 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
ESRRA-202ENST00000405666 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
ESRRA-202ENST00000405666 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
ESRRA-202ENST00000405666 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
ESRRA-202ENST00000405666 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
ESRRA-202ENST00000405666 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
ESRRA-202ENST00000405666 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
ESRRA-202ENST00000405666 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
ESRRA-202ENST00000405666 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
ESRRA-202ENST00000405666 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
ESRRA-202ENST00000405666 LCE1BQ5T7P3 118 aa4.45□□□□□ -1.7
ESRRA-202ENST00000405666 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
ESRRA-202ENST00000405666 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
ESRRA-202ENST00000405666 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
ESRRA-202ENST00000405666 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
ESRRA-202ENST00000405666 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
ESRRA-202ENST00000405666 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
ESRRA-202ENST00000405666 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
ESRRA-202ENST00000405666 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
ESRRA-202ENST00000405666 KRTAP21-1Q3LI58 79 aa3.79□□□□□ -1.8
ESRRA-202ENST00000405666 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
ESRRA-202ENST00000405666 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.81
ESRRA-202ENST00000405666 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
ESRRA-202ENST00000405666 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
ESRRA-202ENST00000405666 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
ESRRA-202ENST00000405666 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
ESRRA-202ENST00000405666 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms