RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 SPRR2BP35325 72 aa5.41□□□□□ -1.54
VAMP2-202ENST00000404970 SPRR2AP35326 72 aa5.41□□□□□ -1.54
VAMP2-202ENST00000404970 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
VAMP2-202ENST00000404970 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
VAMP2-202ENST00000404970 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
VAMP2-202ENST00000404970 K7ERS5 55 aa5.34□□□□□ -1.55
VAMP2-202ENST00000404970 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
VAMP2-202ENST00000404970 A6NED7 52 aa5.32□□□□□ -1.56
VAMP2-202ENST00000404970 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
VAMP2-202ENST00000404970 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
VAMP2-202ENST00000404970 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
VAMP2-202ENST00000404970 TNP1P09430 55 aa5.28□□□□□ -1.56
VAMP2-202ENST00000404970 H3BS24 57 aa5.26□□□□□ -1.57
VAMP2-202ENST00000404970 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
VAMP2-202ENST00000404970 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
VAMP2-202ENST00000404970 MT1EP04732 61 aa5.23□□□□□ -1.57
VAMP2-202ENST00000404970 SPRR2DP22532 72 aa5.22□□□□□ -1.57
VAMP2-202ENST00000404970 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
VAMP2-202ENST00000404970 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
VAMP2-202ENST00000404970 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
VAMP2-202ENST00000404970 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
VAMP2-202ENST00000404970 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
VAMP2-202ENST00000404970 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
VAMP2-202ENST00000404970 MT1LQ93083 61 aa5.03□□□□□ -1.6
VAMP2-202ENST00000404970 MT1GP13640 62 aa4.98□□□□□ -1.61
VAMP2-202ENST00000404970 ROMO1P60602 79 aa4.97□□□□□ -1.61
VAMP2-202ENST00000404970 MT1MQ8N339 61 aa4.97□□□□□ -1.61
VAMP2-202ENST00000404970 KRTAP23-1A1A580 65 aa4.96□□□□□ -1.62
VAMP2-202ENST00000404970 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
VAMP2-202ENST00000404970 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
VAMP2-202ENST00000404970 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
VAMP2-202ENST00000404970 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.62
VAMP2-202ENST00000404970 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
VAMP2-202ENST00000404970 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
VAMP2-202ENST00000404970 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
VAMP2-202ENST00000404970 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
VAMP2-202ENST00000404970 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.66
VAMP2-202ENST00000404970 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
VAMP2-202ENST00000404970 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
VAMP2-202ENST00000404970 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
VAMP2-202ENST00000404970 MT4P47944 62 aa4.57□□□□□ -1.68
VAMP2-202ENST00000404970 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
VAMP2-202ENST00000404970 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
VAMP2-202ENST00000404970 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
VAMP2-202ENST00000404970 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
VAMP2-202ENST00000404970 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
VAMP2-202ENST00000404970 KRTAP20-2Q3LI61 65 aa4.35□□□□□ -1.71
VAMP2-202ENST00000404970 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
VAMP2-202ENST00000404970 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
VAMP2-202ENST00000404970 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
VAMP2-202ENST00000404970 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
VAMP2-202ENST00000404970 MT1AP04731 61 aa4.26□□□□□ -1.73
VAMP2-202ENST00000404970 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
VAMP2-202ENST00000404970 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
VAMP2-202ENST00000404970 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
VAMP2-202ENST00000404970 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
VAMP2-202ENST00000404970 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
VAMP2-202ENST00000404970 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
VAMP2-202ENST00000404970 MT3P25713 68 aa3.85□□□□□ -1.79
VAMP2-202ENST00000404970 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
VAMP2-202ENST00000404970 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
VAMP2-202ENST00000404970 INE1O15225 51 aa3.67□□□□□ -1.82
VAMP2-202ENST00000404970 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
VAMP2-202ENST00000404970 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
VAMP2-202ENST00000404970 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
VAMP2-202ENST00000404970 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
VAMP2-202ENST00000404970 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
VAMP2-202ENST00000404970 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
VAMP2-202ENST00000404970 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
VAMP2-202ENST00000404970 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
VAMP2-202ENST00000404970 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
VAMP2-202ENST00000404970 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
VAMP2-202ENST00000404970 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
VAMP2-202ENST00000404970 PRM1P04553 51 aa2.54□□□□□ -2
VAMP2-202ENST00000404970 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VAMP2-202ENST00000404970 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
VAMP2-202ENST00000404970 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms