RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
SMS-202ENST00000404933 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
SMS-202ENST00000404933 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
SMS-202ENST00000404933 KMT2DO14686 5537 aa4.37□□□□□ -1.71
SMS-202ENST00000404933 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
SMS-202ENST00000404933 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
SMS-202ENST00000404933 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
SMS-202ENST00000404933 MT1EP04732 61 aa4.24□□□□□ -1.73
SMS-202ENST00000404933 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SMS-202ENST00000404933 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
SMS-202ENST00000404933 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
SMS-202ENST00000404933 MT1LQ93083 61 aa4.18□□□□□ -1.74
SMS-202ENST00000404933 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
SMS-202ENST00000404933 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
SMS-202ENST00000404933 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SMS-202ENST00000404933 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
SMS-202ENST00000404933 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
SMS-202ENST00000404933 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
SMS-202ENST00000404933 MT1GP13640 62 aa4.03□□□□□ -1.76
SMS-202ENST00000404933 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
SMS-202ENST00000404933 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
SMS-202ENST00000404933 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
SMS-202ENST00000404933 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
SMS-202ENST00000404933 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
SMS-202ENST00000404933 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
SMS-202ENST00000404933 MT1MQ8N339 61 aa3.98□□□□□ -1.77
SMS-202ENST00000404933 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
SMS-202ENST00000404933 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
SMS-202ENST00000404933 SYNE2Q8WXH0 6885 aaKnown RBP3.9□□□□□ -1.79
SMS-202ENST00000404933 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
SMS-202ENST00000404933 SPRR2EP22531 72 aa3.81□□□□□ -1.8
SMS-202ENST00000404933 SPRR2BP35325 72 aa3.81□□□□□ -1.8
SMS-202ENST00000404933 SPRR2AP35326 72 aa3.81□□□□□ -1.8
SMS-202ENST00000404933 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
SMS-202ENST00000404933 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
SMS-202ENST00000404933 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
SMS-202ENST00000404933 SPRR2DP22532 72 aa3.66□□□□□ -1.82
SMS-202ENST00000404933 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
SMS-202ENST00000404933 MT1AP04731 61 aa3.56□□□□□ -1.84
SMS-202ENST00000404933 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
SMS-202ENST00000404933 NEBP20929 6669 aa3.5□□□□□ -1.85
SMS-202ENST00000404933 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
SMS-202ENST00000404933 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
SMS-202ENST00000404933 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SMS-202ENST00000404933 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
SMS-202ENST00000404933 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SMS-202ENST00000404933 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SMS-202ENST00000404933 MT3P25713 68 aa3.22□□□□□ -1.89
SMS-202ENST00000404933 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
SMS-202ENST00000404933 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.89
SMS-202ENST00000404933 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
SMS-202ENST00000404933 MT4P47944 62 aa3.17□□□□□ -1.9
SMS-202ENST00000404933 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
SMS-202ENST00000404933 PRM1P04553 51 aa3.07□□□□□ -1.92
SMS-202ENST00000404933 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SMS-202ENST00000404933 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
SMS-202ENST00000404933 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
SMS-202ENST00000404933 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SMS-202ENST00000404933 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SMS-202ENST00000404933 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
SMS-202ENST00000404933 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
SMS-202ENST00000404933 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
SMS-202ENST00000404933 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
SMS-202ENST00000404933 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
SMS-202ENST00000404933 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
SMS-202ENST00000404933 LCE1CQ5T751 118 aa2.56□□□□□ -2
SMS-202ENST00000404933 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SMS-202ENST00000404933 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
SMS-202ENST00000404933 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
SMS-202ENST00000404933 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
SMS-202ENST00000404933 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SMS-202ENST00000404933 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SMS-202ENST00000404933 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SMS-202ENST00000404933 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SMS-202ENST00000404933 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
SMS-202ENST00000404933 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SMS-202ENST00000404933 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 111.1 ms