RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
HMGB3P19-201ENST00000403971 A0A1B0GU69 56 aa1.86□□□□□ -2.11
HMGB3P19-201ENST00000403971 MT2AP02795 61 aa1.86□□□□□ -2.11
HMGB3P19-201ENST00000403971 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
HMGB3P19-201ENST00000403971 M0QZ58 72 aa1.84□□□□□ -2.11
HMGB3P19-201ENST00000403971 MT1FP04733 61 aa1.84□□□□□ -2.11
HMGB3P19-201ENST00000403971 SPRR2GQ9BYE4 73 aa1.83□□□□□ -2.12
HMGB3P19-201ENST00000403971 Q5VV11 94 aa1.82□□□□□ -2.12
HMGB3P19-201ENST00000403971 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
HMGB3P19-201ENST00000403971 UQCR11O14957 56 aa1.8□□□□□ -2.12
HMGB3P19-201ENST00000403971 KRTAP19-8Q3LI54 63 aa1.79□□□□□ -2.12
HMGB3P19-201ENST00000403971 A6NN06 94 aa1.78□□□□□ -2.12
HMGB3P19-201ENST00000403971 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
HMGB3P19-201ENST00000403971 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
HMGB3P19-201ENST00000403971 SPATA8Q6RVD6 105 aa1.77□□□□□ -2.13
HMGB3P19-201ENST00000403971 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
HMGB3P19-201ENST00000403971 MT1BP07438 61 aa1.75□□□□□ -2.13
HMGB3P19-201ENST00000403971 LINC01554Q52M75 96 aa1.75□□□□□ -2.13
HMGB3P19-201ENST00000403971 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
HMGB3P19-201ENST00000403971 A0A0D9SG42 100 aa1.73□□□□□ -2.13
HMGB3P19-201ENST00000403971 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
HMGB3P19-201ENST00000403971 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
HMGB3P19-201ENST00000403971 USH2AO75445 5202 aa1.7□□□□□ -2.14
HMGB3P19-201ENST00000403971 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
HMGB3P19-201ENST00000403971 BRK1Q8WUW1 75 aa1.69□□□□□ -2.14
HMGB3P19-201ENST00000403971 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
HMGB3P19-201ENST00000403971 MT1XP80297 61 aa1.67□□□□□ -2.14
HMGB3P19-201ENST00000403971 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
HMGB3P19-201ENST00000403971 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
HMGB3P19-201ENST00000403971 TNP1P09430 55 aa1.62□□□□□ -2.15
HMGB3P19-201ENST00000403971 ROMO1P60602 79 aa1.62□□□□□ -2.15
HMGB3P19-201ENST00000403971 PMAIP1Q13794 54 aa1.61□□□□□ -2.15
HMGB3P19-201ENST00000403971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P19-201ENST00000403971 FSIP2Q5CZC0 6907 aa1.58□□□□□ -2.16
HMGB3P19-201ENST00000403971 KMT2DO14686 5537 aa1.53□□□□□ -2.16
HMGB3P19-201ENST00000403971 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
HMGB3P19-201ENST00000403971 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
HMGB3P19-201ENST00000403971 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
HMGB3P19-201ENST00000403971 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
HMGB3P19-201ENST00000403971 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
HMGB3P19-201ENST00000403971 MT1EP04732 61 aa1.47□□□□□ -2.17
HMGB3P19-201ENST00000403971 SPRR2FQ96RM1 72 aa1.47□□□□□ -2.17
HMGB3P19-201ENST00000403971 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
HMGB3P19-201ENST00000403971 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
HMGB3P19-201ENST00000403971 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
HMGB3P19-201ENST00000403971 MT1LQ93083 61 aa1.44□□□□□ -2.18
HMGB3P19-201ENST00000403971 MT1GP13640 62 aa1.43□□□□□ -2.18
HMGB3P19-201ENST00000403971 SPRR2EP22531 72 aa1.41□□□□□ -2.18
HMGB3P19-201ENST00000403971 SPRR2BP35325 72 aa1.41□□□□□ -2.18
HMGB3P19-201ENST00000403971 SPRR2AP35326 72 aa1.41□□□□□ -2.18
HMGB3P19-201ENST00000403971 MT1MQ8N339 61 aa1.39□□□□□ -2.19
HMGB3P19-201ENST00000403971 MDN1Q9NU22 5596 aa1.38□□□□□ -2.19
HMGB3P19-201ENST00000403971 SYNE2Q8WXH0 6885 aaKnown RBP1.37□□□□□ -2.19
HMGB3P19-201ENST00000403971 SPRR2DP22532 72 aa1.36□□□□□ -2.19
HMGB3P19-201ENST00000403971 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
HMGB3P19-201ENST00000403971 KRTAP2-4Q9BYR9 128 aa1.33□□□□□ -2.2
HMGB3P19-201ENST00000403971 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
HMGB3P19-201ENST00000403971 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
HMGB3P19-201ENST00000403971 NEBP20929 6669 aa1.28□□□□□ -2.2
HMGB3P19-201ENST00000403971 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
HMGB3P19-201ENST00000403971 MT1AP04731 61 aa1.23□□□□□ -2.21
HMGB3P19-201ENST00000403971 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
HMGB3P19-201ENST00000403971 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
HMGB3P19-201ENST00000403971 MT4P47944 62 aa1.17□□□□□ -2.22
HMGB3P19-201ENST00000403971 KRTAP20-2Q3LI61 65 aa1.16□□□□□ -2.22
HMGB3P19-201ENST00000403971 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
HMGB3P19-201ENST00000403971 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
HMGB3P19-201ENST00000403971 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
HMGB3P19-201ENST00000403971 INE1O15225 51 aa1□□□□□ -2.25
HMGB3P19-201ENST00000403971 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
HMGB3P19-201ENST00000403971 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
HMGB3P19-201ENST00000403971 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
HMGB3P19-201ENST00000403971 MUC5BQ9HC84 5762 aaPredicted RBP0.84□□□□□ -2.28
HMGB3P19-201ENST00000403971 PRM1P04553 51 aa0.82□□□□□ -2.28
HMGB3P19-201ENST00000403971 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
HMGB3P19-201ENST00000403971 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
HMGB3P19-201ENST00000403971 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms