RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461		K7EQZ3	153 aa		2.96	□□□□□ -1.94
CEACAM1-208	ENST00000403461	KRTAP25-1	Q3LHN0	102 aa		2.96	□□□□□ -1.94
CEACAM1-208	ENST00000403461	LOC101927531	A0A1B0GV80	90 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	SPRR2E	P22531	72 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	SPRR2B	P35325	72 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	SPRR2A	P35326	72 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	SPRR2F	Q96RM1	72 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	LCE3D	Q9BYE3	92 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	CRIPT	Q9P021	101 aa		2.94	□□□□□ -1.94
CEACAM1-208	ENST00000403461	CHKB-CPT1B	H3BT56	60 aa		2.93	□□□□□ -1.94
CEACAM1-208	ENST00000403461	MIR22HG	Q0VDD5	57 aa		2.93	□□□□□ -1.94
CEACAM1-208	ENST00000403461	LCE1C	Q5T751	118 aa		2.92	□□□□□ -1.94
CEACAM1-208	ENST00000403461	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
CEACAM1-208	ENST00000403461	UBL5	Q9BZL1	73 aa		2.92	□□□□□ -1.94
CEACAM1-208	ENST00000403461	KRTAP2-1	Q9BYU5	128 aa		2.91	□□□□□ -1.94
CEACAM1-208	ENST00000403461	PRO2289	Q9P1D8	64 aa		2.91	□□□□□ -1.94
CEACAM1-208	ENST00000403461	SPINT4	Q6UDR6	99 aa		2.89	□□□□□ -1.95
CEACAM1-208	ENST00000403461	GPR98	Q8WXG9	6306 aa		2.88	□□□□□ -1.95
CEACAM1-208	ENST00000403461	KRTAP8-1	Q8IUC2	63 aa		2.87	□□□□□ -1.95
CEACAM1-208	ENST00000403461		R4GN34	69 aa		2.87	□□□□□ -1.95
CEACAM1-208	ENST00000403461	SPRR5	A0A1B0GTR4	108 aa		2.86	□□□□□ -1.95
CEACAM1-208	ENST00000403461		P0C880	135 aa		2.86	□□□□□ -1.95
CEACAM1-208	ENST00000403461	SPRR2D	P22532	72 aa		2.85	□□□□□ -1.95
CEACAM1-208	ENST00000403461	DMAC1	Q96GE9	116 aa		2.84	□□□□□ -1.95
CEACAM1-208	ENST00000403461	TP53AIP1	Q9HCN2	124 aa		2.83	□□□□□ -1.96
CEACAM1-208	ENST00000403461	PLAC4	Q8WY50	150 aa		2.82	□□□□□ -1.96
CEACAM1-208	ENST00000403461	PP632	Q6XCG6	107 aa		2.81	□□□□□ -1.96
CEACAM1-208	ENST00000403461		H0YAA0	97 aa		2.8	□□□□□ -1.96
CEACAM1-208	ENST00000403461	PRR15L	Q9BU68	103 aa		2.8	□□□□□ -1.96
CEACAM1-208	ENST00000403461	SNURF	Q9Y675	71 aa		2.8	□□□□□ -1.96
CEACAM1-208	ENST00000403461	MT1X	P80297	61 aa		2.78	□□□□□ -1.96
CEACAM1-208	ENST00000403461		A0A087WVE0	104 aa		2.77	□□□□□ -1.97
CEACAM1-208	ENST00000403461	LINC01558	Q9Y6Z2	57 aa		2.77	□□□□□ -1.97
CEACAM1-208	ENST00000403461		H0Y9P7	68 aa		2.73	□□□□□ -1.97
CEACAM1-208	ENST00000403461	KRTAP5-8	O75690	187 aa		2.73	□□□□□ -1.97
CEACAM1-208	ENST00000403461	UQCR11	O14957	56 aa		2.72	□□□□□ -1.97
CEACAM1-208	ENST00000403461		M0QZ58	72 aa		2.7	□□□□□ -1.98
CEACAM1-208	ENST00000403461	LINC00208	Q96KT6	92 aa		2.7	□□□□□ -1.98
CEACAM1-208	ENST00000403461	SPATA8	Q6RVD6	105 aa		2.69	□□□□□ -1.98
CEACAM1-208	ENST00000403461	DST	Q03001	7570 aa	Known RBP	2.65	□□□□□ -1.99
CEACAM1-208	ENST00000403461	HMCN1	Q96RW7	5635 aa		2.56	□□□□□ -2
CEACAM1-208	ENST00000403461	COA5	Q86WW8	74 aa		2.54	□□□□□ -2
CEACAM1-208	ENST00000403461	ACYP2	P14621	99 aa		2.53	□□□□□ -2
CEACAM1-208	ENST00000403461	KRTAP19-3	Q7Z4W3	81 aa		2.53	□□□□□ -2
CEACAM1-208	ENST00000403461	AHNAK2	Q8IVF2	5795 aa		2.53	□□□□□ -2
CEACAM1-208	ENST00000403461	INE1	O15225	51 aa		2.51	□□□□□ -2.01
CEACAM1-208	ENST00000403461		A0A1B0GU69	56 aa		2.5	□□□□□ -2.01
CEACAM1-208	ENST00000403461	MT1E	P04732	61 aa		2.5	□□□□□ -2.01
CEACAM1-208	ENST00000403461	MT4	P47944	62 aa		2.49	□□□□□ -2.01
CEACAM1-208	ENST00000403461	KRTAP19-7	Q3SYF9	63 aa		2.48	□□□□□ -2.01
CEACAM1-208	ENST00000403461	MT1G	P13640	62 aa		2.45	□□□□□ -2.02
CEACAM1-208	ENST00000403461	KRTAP5-10	Q6L8G5	202 aa		2.44	□□□□□ -2.02
CEACAM1-208	ENST00000403461		A0A0D9SG42	100 aa		2.4	□□□□□ -2.03
CEACAM1-208	ENST00000403461	KRTAP19-5	Q3LI72	72 aa		2.4	□□□□□ -2.03
CEACAM1-208	ENST00000403461	KRTAP5-7	Q6L8G8	165 aa		2.39	□□□□□ -2.03
CEACAM1-208	ENST00000403461	MUC19	Q7Z5P9	8384 aa		2.39	□□□□□ -2.03
CEACAM1-208	ENST00000403461	MT1M	Q8N339	61 aa		2.38	□□□□□ -2.03
CEACAM1-208	ENST00000403461	KRTAP13-4	Q3LI77	160 aa		2.37	□□□□□ -2.03
CEACAM1-208	ENST00000403461	MT1L	Q93083	61 aa		2.35	□□□□□ -2.03
CEACAM1-208	ENST00000403461	KRTAP20-2	Q3LI61	65 aa		2.27	□□□□□ -2.05
CEACAM1-208	ENST00000403461	C10orf95	Q9H7T3	257 aa		2.27	□□□□□ -2.05
CEACAM1-208	ENST00000403461	KRTAP12-4	P60329	112 aa		2.26	□□□□□ -2.05
CEACAM1-208	ENST00000403461	TNP1	P09430	55 aa		2.25	□□□□□ -2.05
CEACAM1-208	ENST00000403461	KRTAP12-1	P59990	96 aa		2.25	□□□□□ -2.05
CEACAM1-208	ENST00000403461	AHNAK	Q09666	5890 aa	Known RBP	2.22	□□□□□ -2.05
CEACAM1-208	ENST00000403461	KRTAP12-3	P60328	96 aa		2.2	□□□□□ -2.06
CEACAM1-208	ENST00000403461	SYNE1	Q8NF91	8797 aa	Known RBP	2.14	□□□□□ -2.07
CEACAM1-208	ENST00000403461	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.14	□□□□□ -2.07
CEACAM1-208	ENST00000403461	MUC5AC	P98088	5654 aa		2.14	□□□□□ -2.07
CEACAM1-208	ENST00000403461	KRTAP21-2	Q3LI59	83 aa		2.1	□□□□□ -2.07
CEACAM1-208	ENST00000403461	MT1A	P04731	61 aa		2.01	□□□□□ -2.09
CEACAM1-208	ENST00000403461	KRTAP6-1	Q3LI64	71 aa		1.98	□□□□□ -2.09
CEACAM1-208	ENST00000403461	KRTAP6-2	Q3LI66	62 aa		1.95	□□□□□ -2.1
CEACAM1-208	ENST00000403461	PHGR1	C9JFL3	82 aa		1.47	□□□□□ -2.17
CEACAM1-208	ENST00000403461	PRM1	P04553	51 aa		1.21	□□□□□ -2.22
CEACAM1-208	ENST00000403461	KRTAP21-1	Q3LI58	79 aa		1.13	□□□□□ -2.23
CEACAM1-208	ENST00000403461	MUC16	Q8WXI7	14507 aa		1.01	□□□□□ -2.25

Retrieved 77 of 20,778 RNA–protein pairs in 122.1 ms