RNA–Protein interactions for RNA: ENST00000402849.5

SNRPD3-202, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 2 BASIC

Gene SNRPD3, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-202ENST00000402849 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
SNRPD3-202ENST00000402849 MACF1Q9UPN3 7388 aaKnown RBP2.93□□□□□ -1.94
SNRPD3-202ENST00000402849 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
SNRPD3-202ENST00000402849 KMT2DO14686 5537 aa2.89□□□□□ -1.95
SNRPD3-202ENST00000402849 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
SNRPD3-202ENST00000402849 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
SNRPD3-202ENST00000402849 TNP1P09430 55 aa2.85□□□□□ -1.95
SNRPD3-202ENST00000402849 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
SNRPD3-202ENST00000402849 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
SNRPD3-202ENST00000402849 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
SNRPD3-202ENST00000402849 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
SNRPD3-202ENST00000402849 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
SNRPD3-202ENST00000402849 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
SNRPD3-202ENST00000402849 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
SNRPD3-202ENST00000402849 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
SNRPD3-202ENST00000402849 SPRR2EP22531 72 aa2.73□□□□□ -1.97
SNRPD3-202ENST00000402849 SPRR2BP35325 72 aa2.73□□□□□ -1.97
SNRPD3-202ENST00000402849 SPRR2AP35326 72 aa2.73□□□□□ -1.97
SNRPD3-202ENST00000402849 MT1EP04732 61 aa2.71□□□□□ -1.98
SNRPD3-202ENST00000402849 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
SNRPD3-202ENST00000402849 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
SNRPD3-202ENST00000402849 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
SNRPD3-202ENST00000402849 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
SNRPD3-202ENST00000402849 SPRR2DP22532 72 aa2.63□□□□□ -1.99
SNRPD3-202ENST00000402849 MT1LQ93083 61 aa2.63□□□□□ -1.99
SNRPD3-202ENST00000402849 NEBP20929 6669 aa2.62□□□□□ -1.99
SNRPD3-202ENST00000402849 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
SNRPD3-202ENST00000402849 INE1O15225 51 aa2.59□□□□□ -1.99
SNRPD3-202ENST00000402849 MT1GP13640 62 aa2.59□□□□□ -1.99
SNRPD3-202ENST00000402849 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SNRPD3-202ENST00000402849 MT1MQ8N339 61 aa2.57□□□□□ -2
SNRPD3-202ENST00000402849 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
SNRPD3-202ENST00000402849 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
SNRPD3-202ENST00000402849 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
SNRPD3-202ENST00000402849 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
SNRPD3-202ENST00000402849 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
SNRPD3-202ENST00000402849 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
SNRPD3-202ENST00000402849 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
SNRPD3-202ENST00000402849 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
SNRPD3-202ENST00000402849 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
SNRPD3-202ENST00000402849 MT4P47944 62 aa2.32□□□□□ -2.04
SNRPD3-202ENST00000402849 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
SNRPD3-202ENST00000402849 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
SNRPD3-202ENST00000402849 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
SNRPD3-202ENST00000402849 MT1AP04731 61 aa2.22□□□□□ -2.05
SNRPD3-202ENST00000402849 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
SNRPD3-202ENST00000402849 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
SNRPD3-202ENST00000402849 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
SNRPD3-202ENST00000402849 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
SNRPD3-202ENST00000402849 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
SNRPD3-202ENST00000402849 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SNRPD3-202ENST00000402849 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
SNRPD3-202ENST00000402849 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
SNRPD3-202ENST00000402849 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
SNRPD3-202ENST00000402849 MT3P25713 68 aa2.04□□□□□ -2.08
SNRPD3-202ENST00000402849 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
SNRPD3-202ENST00000402849 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
SNRPD3-202ENST00000402849 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
SNRPD3-202ENST00000402849 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
SNRPD3-202ENST00000402849 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SNRPD3-202ENST00000402849 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
SNRPD3-202ENST00000402849 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
SNRPD3-202ENST00000402849 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
SNRPD3-202ENST00000402849 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
SNRPD3-202ENST00000402849 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
SNRPD3-202ENST00000402849 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SNRPD3-202ENST00000402849 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
SNRPD3-202ENST00000402849 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
SNRPD3-202ENST00000402849 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
SNRPD3-202ENST00000402849 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
SNRPD3-202ENST00000402849 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
SNRPD3-202ENST00000402849 PRM1P04553 51 aa1.49□□□□□ -2.17
SNRPD3-202ENST00000402849 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SNRPD3-202ENST00000402849 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
SNRPD3-202ENST00000402849 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
SNRPD3-202ENST00000402849 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SNRPD3-202ENST00000402849 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 332.2 ms