RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
PRAME-203ENST00000402697 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
PRAME-203ENST00000402697 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
PRAME-203ENST00000402697 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
PRAME-203ENST00000402697 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
PRAME-203ENST00000402697 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
PRAME-203ENST00000402697 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
PRAME-203ENST00000402697 MT1GP13640 62 aa4.33□□□□□ -1.72
PRAME-203ENST00000402697 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
PRAME-203ENST00000402697 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
PRAME-203ENST00000402697 MT1MQ8N339 61 aa4.26□□□□□ -1.73
PRAME-203ENST00000402697 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
PRAME-203ENST00000402697 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
PRAME-203ENST00000402697 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
PRAME-203ENST00000402697 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
PRAME-203ENST00000402697 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
PRAME-203ENST00000402697 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
PRAME-203ENST00000402697 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
PRAME-203ENST00000402697 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.76
PRAME-203ENST00000402697 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
PRAME-203ENST00000402697 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
PRAME-203ENST00000402697 SPRR2EP22531 72 aa4.01□□□□□ -1.77
PRAME-203ENST00000402697 SPRR2BP35325 72 aa4.01□□□□□ -1.77
PRAME-203ENST00000402697 SPRR2AP35326 72 aa4.01□□□□□ -1.77
PRAME-203ENST00000402697 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
PRAME-203ENST00000402697 MT1AP04731 61 aa3.9□□□□□ -1.79
PRAME-203ENST00000402697 SPRR2DP22532 72 aa3.86□□□□□ -1.79
PRAME-203ENST00000402697 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
PRAME-203ENST00000402697 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
PRAME-203ENST00000402697 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
PRAME-203ENST00000402697 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
PRAME-203ENST00000402697 NEBP20929 6669 aa3.78□□□□□ -1.8
PRAME-203ENST00000402697 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
PRAME-203ENST00000402697 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
PRAME-203ENST00000402697 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
PRAME-203ENST00000402697 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
PRAME-203ENST00000402697 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
PRAME-203ENST00000402697 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
PRAME-203ENST00000402697 MT3P25713 68 aa3.51□□□□□ -1.85
PRAME-203ENST00000402697 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
PRAME-203ENST00000402697 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
PRAME-203ENST00000402697 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.86
PRAME-203ENST00000402697 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
PRAME-203ENST00000402697 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
PRAME-203ENST00000402697 MT4P47944 62 aa3.36□□□□□ -1.87
PRAME-203ENST00000402697 PRM1P04553 51 aa3.35□□□□□ -1.87
PRAME-203ENST00000402697 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
PRAME-203ENST00000402697 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
PRAME-203ENST00000402697 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
PRAME-203ENST00000402697 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
PRAME-203ENST00000402697 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PRAME-203ENST00000402697 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
PRAME-203ENST00000402697 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
PRAME-203ENST00000402697 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.93
PRAME-203ENST00000402697 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
PRAME-203ENST00000402697 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
PRAME-203ENST00000402697 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PRAME-203ENST00000402697 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
PRAME-203ENST00000402697 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
PRAME-203ENST00000402697 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
PRAME-203ENST00000402697 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
PRAME-203ENST00000402697 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
PRAME-203ENST00000402697 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
PRAME-203ENST00000402697 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
PRAME-203ENST00000402697 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
PRAME-203ENST00000402697 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
PRAME-203ENST00000402697 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
PRAME-203ENST00000402697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
PRAME-203ENST00000402697 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
PRAME-203ENST00000402697 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
PRAME-203ENST00000402697 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PRAME-203ENST00000402697 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
PRAME-203ENST00000402697 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
PRAME-203ENST00000402697 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
PRAME-203ENST00000402697 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PRAME-203ENST00000402697 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
PRAME-203ENST00000402697 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms