RNA–Protein interactions for RNA: ENST00000400335.8

KREMEN1-202, Transcript of kringle containing transmembrane protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KREMEN1, Length 6,138 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KREMEN1-202ENST00000400335 MT1MQ8N339 61 aa4.03□□□□□ -1.76
KREMEN1-202ENST00000400335 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
KREMEN1-202ENST00000400335 PRM1P04553 51 aa4.01□□□□□ -1.77
KREMEN1-202ENST00000400335 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
KREMEN1-202ENST00000400335 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
KREMEN1-202ENST00000400335 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
KREMEN1-202ENST00000400335 LCE1DQ5T752 114 aa3.96□□□□□ -1.77
KREMEN1-202ENST00000400335 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
KREMEN1-202ENST00000400335 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
KREMEN1-202ENST00000400335 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
KREMEN1-202ENST00000400335 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
KREMEN1-202ENST00000400335 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
KREMEN1-202ENST00000400335 MT1AP04731 61 aa3.8□□□□□ -1.8
KREMEN1-202ENST00000400335 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
KREMEN1-202ENST00000400335 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
KREMEN1-202ENST00000400335 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
KREMEN1-202ENST00000400335 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
KREMEN1-202ENST00000400335 ABCA13Q86UQ4 5058 aa3.78□□□□□ -1.8
KREMEN1-202ENST00000400335 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
KREMEN1-202ENST00000400335 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
KREMEN1-202ENST00000400335 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
KREMEN1-202ENST00000400335 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
KREMEN1-202ENST00000400335 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
KREMEN1-202ENST00000400335 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
KREMEN1-202ENST00000400335 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
KREMEN1-202ENST00000400335 LCE4AQ5TA78 99 aa3.62□□□□□ -1.83
KREMEN1-202ENST00000400335 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
KREMEN1-202ENST00000400335 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
KREMEN1-202ENST00000400335 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
KREMEN1-202ENST00000400335 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
KREMEN1-202ENST00000400335 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
KREMEN1-202ENST00000400335 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
KREMEN1-202ENST00000400335 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
KREMEN1-202ENST00000400335 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
KREMEN1-202ENST00000400335 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
KREMEN1-202ENST00000400335 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
KREMEN1-202ENST00000400335 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
KREMEN1-202ENST00000400335 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
KREMEN1-202ENST00000400335 MUC2Q02817 5179 aa3.47□□□□□ -1.85
KREMEN1-202ENST00000400335 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
KREMEN1-202ENST00000400335 KMT2DO14686 5537 aa3.14□□□□□ -1.91
KREMEN1-202ENST00000400335 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
KREMEN1-202ENST00000400335 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
KREMEN1-202ENST00000400335 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
KREMEN1-202ENST00000400335 USH2AO75445 5202 aa3.04□□□□□ -1.92
KREMEN1-202ENST00000400335 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.92
KREMEN1-202ENST00000400335 NEBP20929 6669 aa3.01□□□□□ -1.93
KREMEN1-202ENST00000400335 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.93
KREMEN1-202ENST00000400335 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
KREMEN1-202ENST00000400335 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
KREMEN1-202ENST00000400335 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
KREMEN1-202ENST00000400335 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
KREMEN1-202ENST00000400335 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
KREMEN1-202ENST00000400335 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
KREMEN1-202ENST00000400335 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
KREMEN1-202ENST00000400335 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
KREMEN1-202ENST00000400335 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
KREMEN1-202ENST00000400335 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
KREMEN1-202ENST00000400335 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
KREMEN1-202ENST00000400335 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
KREMEN1-202ENST00000400335 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
KREMEN1-202ENST00000400335 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
KREMEN1-202ENST00000400335 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
KREMEN1-202ENST00000400335 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
KREMEN1-202ENST00000400335 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
KREMEN1-202ENST00000400335 PHGR1C9JFL3 82 aa2.15□□□□□ -2.06
KREMEN1-202ENST00000400335 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
KREMEN1-202ENST00000400335 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
KREMEN1-202ENST00000400335 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
KREMEN1-202ENST00000400335 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
KREMEN1-202ENST00000400335 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
KREMEN1-202ENST00000400335 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
KREMEN1-202ENST00000400335 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
KREMEN1-202ENST00000400335 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
KREMEN1-202ENST00000400335 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
KREMEN1-202ENST00000400335 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
KREMEN1-202ENST00000400335 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 72.3 ms