RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
CDC42-203ENST00000400259 FCGBPQ9Y6R7 5405 aaPredicted RBP5.4□□□□□ -1.55
CDC42-203ENST00000400259 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.55
CDC42-203ENST00000400259 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
CDC42-203ENST00000400259 MT1GP13640 62 aa5.27□□□□□ -1.57
CDC42-203ENST00000400259 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
CDC42-203ENST00000400259 MT1MQ8N339 61 aa5.23□□□□□ -1.57
CDC42-203ENST00000400259 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
CDC42-203ENST00000400259 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
CDC42-203ENST00000400259 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
CDC42-203ENST00000400259 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
CDC42-203ENST00000400259 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
CDC42-203ENST00000400259 CRCT1Q9UGL9 99 aa5.17□□□□□ -1.58
CDC42-203ENST00000400259 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
CDC42-203ENST00000400259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
CDC42-203ENST00000400259 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
CDC42-203ENST00000400259 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
CDC42-203ENST00000400259 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
CDC42-203ENST00000400259 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
CDC42-203ENST00000400259 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
CDC42-203ENST00000400259 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
CDC42-203ENST00000400259 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
CDC42-203ENST00000400259 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
CDC42-203ENST00000400259 MDN1Q9NU22 5596 aa4.84□□□□□ -1.64
CDC42-203ENST00000400259 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
CDC42-203ENST00000400259 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CDC42-203ENST00000400259 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CDC42-203ENST00000400259 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CDC42-203ENST00000400259 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CDC42-203ENST00000400259 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.65
CDC42-203ENST00000400259 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CDC42-203ENST00000400259 MT1AP04731 61 aa4.7□□□□□ -1.66
CDC42-203ENST00000400259 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
CDC42-203ENST00000400259 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
CDC42-203ENST00000400259 SPRR2DP22532 72 aa4.61□□□□□ -1.67
CDC42-203ENST00000400259 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
CDC42-203ENST00000400259 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
CDC42-203ENST00000400259 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
CDC42-203ENST00000400259 GPR98Q8WXG9 6306 aa4.49□□□□□ -1.69
CDC42-203ENST00000400259 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
CDC42-203ENST00000400259 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
CDC42-203ENST00000400259 NEBP20929 6669 aa4.34□□□□□ -1.71
CDC42-203ENST00000400259 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
CDC42-203ENST00000400259 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
CDC42-203ENST00000400259 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
CDC42-203ENST00000400259 MT3P25713 68 aa4.22□□□□□ -1.73
CDC42-203ENST00000400259 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
CDC42-203ENST00000400259 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
CDC42-203ENST00000400259 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
CDC42-203ENST00000400259 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CDC42-203ENST00000400259 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
CDC42-203ENST00000400259 PRM1P04553 51 aa4.07□□□□□ -1.76
CDC42-203ENST00000400259 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CDC42-203ENST00000400259 MT4P47944 62 aa3.99□□□□□ -1.77
CDC42-203ENST00000400259 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CDC42-203ENST00000400259 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
CDC42-203ENST00000400259 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
CDC42-203ENST00000400259 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CDC42-203ENST00000400259 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
CDC42-203ENST00000400259 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
CDC42-203ENST00000400259 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CDC42-203ENST00000400259 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
CDC42-203ENST00000400259 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
CDC42-203ENST00000400259 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
CDC42-203ENST00000400259 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
CDC42-203ENST00000400259 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CDC42-203ENST00000400259 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CDC42-203ENST00000400259 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
CDC42-203ENST00000400259 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
CDC42-203ENST00000400259 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CDC42-203ENST00000400259 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
CDC42-203ENST00000400259 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
CDC42-203ENST00000400259 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CDC42-203ENST00000400259 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
CDC42-203ENST00000400259 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
CDC42-203ENST00000400259 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
CDC42-203ENST00000400259 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 100.1 ms