RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
DDX3X-201ENST00000399959 LCE5AQ5TCM9 118 aa3.98□□□□□ -1.77
DDX3X-201ENST00000399959 HYDINQ4G0P3 5121 aa3.98□□□□□ -1.77
DDX3X-201ENST00000399959 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
DDX3X-201ENST00000399959 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
DDX3X-201ENST00000399959 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
DDX3X-201ENST00000399959 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
DDX3X-201ENST00000399959 MT1AP04731 61 aa3.87□□□□□ -1.79
DDX3X-201ENST00000399959 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
DDX3X-201ENST00000399959 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
DDX3X-201ENST00000399959 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
DDX3X-201ENST00000399959 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
DDX3X-201ENST00000399959 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
DDX3X-201ENST00000399959 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
DDX3X-201ENST00000399959 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
DDX3X-201ENST00000399959 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
DDX3X-201ENST00000399959 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
DDX3X-201ENST00000399959 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
DDX3X-201ENST00000399959 MT4P47944 62 aa3.71□□□□□ -1.82
DDX3X-201ENST00000399959 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
DDX3X-201ENST00000399959 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
DDX3X-201ENST00000399959 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
DDX3X-201ENST00000399959 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.82
DDX3X-201ENST00000399959 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
DDX3X-201ENST00000399959 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
DDX3X-201ENST00000399959 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
DDX3X-201ENST00000399959 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
DDX3X-201ENST00000399959 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
DDX3X-201ENST00000399959 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
DDX3X-201ENST00000399959 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
DDX3X-201ENST00000399959 RNF213Q63HN8 5207 aa3.54□□□□□ -1.84
DDX3X-201ENST00000399959 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
DDX3X-201ENST00000399959 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
DDX3X-201ENST00000399959 MUC2Q02817 5179 aa3.37□□□□□ -1.87
DDX3X-201ENST00000399959 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
DDX3X-201ENST00000399959 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
DDX3X-201ENST00000399959 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
DDX3X-201ENST00000399959 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
DDX3X-201ENST00000399959 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
DDX3X-201ENST00000399959 USH2AO75445 5202 aa3.15□□□□□ -1.91
DDX3X-201ENST00000399959 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
DDX3X-201ENST00000399959 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
DDX3X-201ENST00000399959 KMT2DO14686 5537 aa3.03□□□□□ -1.93
DDX3X-201ENST00000399959 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
DDX3X-201ENST00000399959 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
DDX3X-201ENST00000399959 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
DDX3X-201ENST00000399959 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
DDX3X-201ENST00000399959 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
DDX3X-201ENST00000399959 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
DDX3X-201ENST00000399959 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
DDX3X-201ENST00000399959 KRTAP20-2Q3LI61 65 aa2.69□□□□□ -1.98
DDX3X-201ENST00000399959 MUC12Q9UKN1 5478 aa2.69□□□□□ -1.98
DDX3X-201ENST00000399959 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
DDX3X-201ENST00000399959 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
DDX3X-201ENST00000399959 MACF1Q9UPN3 7388 aaKnown RBP2.64□□□□□ -1.99
DDX3X-201ENST00000399959 NEBP20929 6669 aa2.51□□□□□ -2.01
DDX3X-201ENST00000399959 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
DDX3X-201ENST00000399959 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
DDX3X-201ENST00000399959 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
DDX3X-201ENST00000399959 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
DDX3X-201ENST00000399959 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
DDX3X-201ENST00000399959 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
DDX3X-201ENST00000399959 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
DDX3X-201ENST00000399959 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
DDX3X-201ENST00000399959 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
DDX3X-201ENST00000399959 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
DDX3X-201ENST00000399959 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
DDX3X-201ENST00000399959 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
DDX3X-201ENST00000399959 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
DDX3X-201ENST00000399959 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
DDX3X-201ENST00000399959 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
DDX3X-201ENST00000399959 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
DDX3X-201ENST00000399959 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
DDX3X-201ENST00000399959 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
DDX3X-201ENST00000399959 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
DDX3X-201ENST00000399959 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
DDX3X-201ENST00000399959 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 55.6 ms