RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
RUNX3-203ENST00000399916 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
RUNX3-203ENST00000399916 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
RUNX3-203ENST00000399916 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
RUNX3-203ENST00000399916 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
RUNX3-203ENST00000399916 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
RUNX3-203ENST00000399916 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
RUNX3-203ENST00000399916 PRM1P04553 51 aa4.44□□□□□ -1.7
RUNX3-203ENST00000399916 KRTAP2-3P0C7H8 128 aa4.43□□□□□ -1.7
RUNX3-203ENST00000399916 KRTAP2-4Q9BYR9 128 aa4.43□□□□□ -1.7
RUNX3-203ENST00000399916 KRTAP2-1Q9BYU5 128 aa4.43□□□□□ -1.7
RUNX3-203ENST00000399916 MT1LQ93083 61 aa4.4□□□□□ -1.7
RUNX3-203ENST00000399916 KRTAP4-9Q9BYQ8 210 aa4.38□□□□□ -1.71
RUNX3-203ENST00000399916 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
RUNX3-203ENST00000399916 MT1EP04732 61 aa4.35□□□□□ -1.71
RUNX3-203ENST00000399916 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
RUNX3-203ENST00000399916 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
RUNX3-203ENST00000399916 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.73
RUNX3-203ENST00000399916 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
RUNX3-203ENST00000399916 SPRR2EP22531 72 aa4.26□□□□□ -1.73
RUNX3-203ENST00000399916 SPRR2BP35325 72 aa4.26□□□□□ -1.73
RUNX3-203ENST00000399916 SPRR2AP35326 72 aa4.26□□□□□ -1.73
RUNX3-203ENST00000399916 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
RUNX3-203ENST00000399916 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
RUNX3-203ENST00000399916 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
RUNX3-203ENST00000399916 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
RUNX3-203ENST00000399916 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
RUNX3-203ENST00000399916 SPRR2DP22532 72 aa4.11□□□□□ -1.75
RUNX3-203ENST00000399916 MT1MQ8N339 61 aa4.09□□□□□ -1.75
RUNX3-203ENST00000399916 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
RUNX3-203ENST00000399916 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
RUNX3-203ENST00000399916 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
RUNX3-203ENST00000399916 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
RUNX3-203ENST00000399916 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
RUNX3-203ENST00000399916 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
RUNX3-203ENST00000399916 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
RUNX3-203ENST00000399916 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
RUNX3-203ENST00000399916 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
RUNX3-203ENST00000399916 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
RUNX3-203ENST00000399916 NEBP20929 6669 aa3.75□□□□□ -1.81
RUNX3-203ENST00000399916 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
RUNX3-203ENST00000399916 MT4P47944 62 aa3.68□□□□□ -1.82
RUNX3-203ENST00000399916 MT1AP04731 61 aa3.67□□□□□ -1.82
RUNX3-203ENST00000399916 MT3P25713 68 aa3.59□□□□□ -1.83
RUNX3-203ENST00000399916 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
RUNX3-203ENST00000399916 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
RUNX3-203ENST00000399916 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
RUNX3-203ENST00000399916 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
RUNX3-203ENST00000399916 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
RUNX3-203ENST00000399916 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
RUNX3-203ENST00000399916 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
RUNX3-203ENST00000399916 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RUNX3-203ENST00000399916 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
RUNX3-203ENST00000399916 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
RUNX3-203ENST00000399916 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
RUNX3-203ENST00000399916 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
RUNX3-203ENST00000399916 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
RUNX3-203ENST00000399916 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RUNX3-203ENST00000399916 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
RUNX3-203ENST00000399916 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
RUNX3-203ENST00000399916 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
RUNX3-203ENST00000399916 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
RUNX3-203ENST00000399916 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
RUNX3-203ENST00000399916 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
RUNX3-203ENST00000399916 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
RUNX3-203ENST00000399916 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
RUNX3-203ENST00000399916 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
RUNX3-203ENST00000399916 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
RUNX3-203ENST00000399916 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
RUNX3-203ENST00000399916 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
RUNX3-203ENST00000399916 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
RUNX3-203ENST00000399916 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
RUNX3-203ENST00000399916 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
RUNX3-203ENST00000399916 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
RUNX3-203ENST00000399916 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
RUNX3-203ENST00000399916 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
RUNX3-203ENST00000399916 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 69.6 ms