RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 MT1LQ93083 61 aa3.42□□□□□ -1.86
USP19-204ENST00000398896 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
USP19-204ENST00000398896 MT1GP13640 62 aa3.38□□□□□ -1.87
USP19-204ENST00000398896 PRM1P04553 51 aa3.34□□□□□ -1.88
USP19-204ENST00000398896 KMT2DO14686 5537 aa3.34□□□□□ -1.88
USP19-204ENST00000398896 MT1EP04732 61 aa3.33□□□□□ -1.88
USP19-204ENST00000398896 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
USP19-204ENST00000398896 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
USP19-204ENST00000398896 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
USP19-204ENST00000398896 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
USP19-204ENST00000398896 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
USP19-204ENST00000398896 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
USP19-204ENST00000398896 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
USP19-204ENST00000398896 KRTAP9-7A8MTY7 169 aa3.2□□□□□ -1.9
USP19-204ENST00000398896 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
USP19-204ENST00000398896 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
USP19-204ENST00000398896 KRTAP9-2Q9BYQ4 174 aa3.18□□□□□ -1.9
USP19-204ENST00000398896 KRTAP9-6A0A140TA67 174 aa3.16□□□□□ -1.9
USP19-204ENST00000398896 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
USP19-204ENST00000398896 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
USP19-204ENST00000398896 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
USP19-204ENST00000398896 MT1MQ8N339 61 aa3.12□□□□□ -1.91
USP19-204ENST00000398896 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
USP19-204ENST00000398896 MT1AP04731 61 aa3.09□□□□□ -1.91
USP19-204ENST00000398896 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
USP19-204ENST00000398896 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
USP19-204ENST00000398896 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
USP19-204ENST00000398896 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
USP19-204ENST00000398896 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
USP19-204ENST00000398896 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
USP19-204ENST00000398896 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
USP19-204ENST00000398896 SPRR2EP22531 72 aa2.93□□□□□ -1.94
USP19-204ENST00000398896 SPRR2BP35325 72 aa2.93□□□□□ -1.94
USP19-204ENST00000398896 SPRR2AP35326 72 aa2.93□□□□□ -1.94
USP19-204ENST00000398896 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
USP19-204ENST00000398896 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
USP19-204ENST00000398896 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
USP19-204ENST00000398896 MDN1Q9NU22 5596 aa2.82□□□□□ -1.96
USP19-204ENST00000398896 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
USP19-204ENST00000398896 SPRR2DP22532 72 aa2.82□□□□□ -1.96
USP19-204ENST00000398896 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
USP19-204ENST00000398896 MT3P25713 68 aa2.72□□□□□ -1.97
USP19-204ENST00000398896 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
USP19-204ENST00000398896 KRTAP9-4Q9BYQ2 154 aa2.66□□□□□ -1.98
USP19-204ENST00000398896 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
USP19-204ENST00000398896 LCE1FQ5T754 118 aa2.58□□□□□ -2
USP19-204ENST00000398896 MT4P47944 62 aa2.56□□□□□ -2
USP19-204ENST00000398896 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
USP19-204ENST00000398896 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
USP19-204ENST00000398896 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
USP19-204ENST00000398896 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
USP19-204ENST00000398896 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
USP19-204ENST00000398896 KRTAP5-9P26371 169 aa2.34□□□□□ -2.04
USP19-204ENST00000398896 NEBP20929 6669 aa2.31□□□□□ -2.04
USP19-204ENST00000398896 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
USP19-204ENST00000398896 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
USP19-204ENST00000398896 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
USP19-204ENST00000398896 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
USP19-204ENST00000398896 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
USP19-204ENST00000398896 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
USP19-204ENST00000398896 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
USP19-204ENST00000398896 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
USP19-204ENST00000398896 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
USP19-204ENST00000398896 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
USP19-204ENST00000398896 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
USP19-204ENST00000398896 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
USP19-204ENST00000398896 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
USP19-204ENST00000398896 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
USP19-204ENST00000398896 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.12
USP19-204ENST00000398896 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
USP19-204ENST00000398896 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
USP19-204ENST00000398896 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
USP19-204ENST00000398896 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
USP19-204ENST00000398896 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
USP19-204ENST00000398896 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
USP19-204ENST00000398896 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
USP19-204ENST00000398896 PHGR1C9JFL3 82 aa1.28□□□□□ -2.21
USP19-204ENST00000398896 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms