RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 SPRR2DP22532 72 aa5.56□□□□□ -1.52
CDH23-205ENST00000398809 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
CDH23-205ENST00000398809 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
CDH23-205ENST00000398809 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
CDH23-205ENST00000398809 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
CDH23-205ENST00000398809 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
CDH23-205ENST00000398809 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CDH23-205ENST00000398809 USH2AO75445 5202 aa5.41□□□□□ -1.54
CDH23-205ENST00000398809 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
CDH23-205ENST00000398809 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
CDH23-205ENST00000398809 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
CDH23-205ENST00000398809 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
CDH23-205ENST00000398809 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
CDH23-205ENST00000398809 KMT2DO14686 5537 aa5.17□□□□□ -1.58
CDH23-205ENST00000398809 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
CDH23-205ENST00000398809 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
CDH23-205ENST00000398809 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
CDH23-205ENST00000398809 MT3P25713 68 aa5.11□□□□□ -1.59
CDH23-205ENST00000398809 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
CDH23-205ENST00000398809 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
CDH23-205ENST00000398809 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
CDH23-205ENST00000398809 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
CDH23-205ENST00000398809 PRM1P04553 51 aa5.08□□□□□ -1.6
CDH23-205ENST00000398809 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
CDH23-205ENST00000398809 MT4P47944 62 aa5.03□□□□□ -1.6
CDH23-205ENST00000398809 MT1AP04731 61 aa4.98□□□□□ -1.61
CDH23-205ENST00000398809 SSPOA2VEC9 5147 aa4.89□□□□□ -1.63
CDH23-205ENST00000398809 LCE1DQ5T752 114 aa4.84□□□□□ -1.64
CDH23-205ENST00000398809 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
CDH23-205ENST00000398809 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
CDH23-205ENST00000398809 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
CDH23-205ENST00000398809 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
CDH23-205ENST00000398809 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
CDH23-205ENST00000398809 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
CDH23-205ENST00000398809 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
CDH23-205ENST00000398809 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
CDH23-205ENST00000398809 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
CDH23-205ENST00000398809 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
CDH23-205ENST00000398809 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CDH23-205ENST00000398809 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
CDH23-205ENST00000398809 MUC19Q7Z5P9 8384 aa4.37□□□□□ -1.71
CDH23-205ENST00000398809 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
CDH23-205ENST00000398809 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CDH23-205ENST00000398809 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
CDH23-205ENST00000398809 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
CDH23-205ENST00000398809 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
CDH23-205ENST00000398809 NEBP20929 6669 aa4.05□□□□□ -1.76
CDH23-205ENST00000398809 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
CDH23-205ENST00000398809 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
CDH23-205ENST00000398809 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
CDH23-205ENST00000398809 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
CDH23-205ENST00000398809 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
CDH23-205ENST00000398809 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CDH23-205ENST00000398809 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CDH23-205ENST00000398809 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
CDH23-205ENST00000398809 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
CDH23-205ENST00000398809 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CDH23-205ENST00000398809 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CDH23-205ENST00000398809 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
CDH23-205ENST00000398809 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
CDH23-205ENST00000398809 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CDH23-205ENST00000398809 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
CDH23-205ENST00000398809 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
CDH23-205ENST00000398809 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
CDH23-205ENST00000398809 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CDH23-205ENST00000398809 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
CDH23-205ENST00000398809 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
CDH23-205ENST00000398809 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
CDH23-205ENST00000398809 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CDH23-205ENST00000398809 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
CDH23-205ENST00000398809 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
CDH23-205ENST00000398809 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
CDH23-205ENST00000398809 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CDH23-205ENST00000398809 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
CDH23-205ENST00000398809 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
CDH23-205ENST00000398809 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
CDH23-205ENST00000398809 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms