RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
TMF1-201ENST00000398559 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
TMF1-201ENST00000398559 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
TMF1-201ENST00000398559 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
TMF1-201ENST00000398559 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
TMF1-201ENST00000398559 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
TMF1-201ENST00000398559 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
TMF1-201ENST00000398559 MT1AP04731 61 aa3.37□□□□□ -1.87
TMF1-201ENST00000398559 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
TMF1-201ENST00000398559 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
TMF1-201ENST00000398559 KRTAP9-2Q9BYQ4 174 aa3.29□□□□□ -1.88
TMF1-201ENST00000398559 LCE5AQ5TCM9 118 aa3.26□□□□□ -1.89
TMF1-201ENST00000398559 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
TMF1-201ENST00000398559 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TMF1-201ENST00000398559 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
TMF1-201ENST00000398559 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
TMF1-201ENST00000398559 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.9
TMF1-201ENST00000398559 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
TMF1-201ENST00000398559 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
TMF1-201ENST00000398559 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
TMF1-201ENST00000398559 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
TMF1-201ENST00000398559 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
TMF1-201ENST00000398559 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
TMF1-201ENST00000398559 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
TMF1-201ENST00000398559 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
TMF1-201ENST00000398559 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
TMF1-201ENST00000398559 LCE1AQ5T7P2 110 aa3.04□□□□□ -1.92
TMF1-201ENST00000398559 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
TMF1-201ENST00000398559 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
TMF1-201ENST00000398559 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
TMF1-201ENST00000398559 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
TMF1-201ENST00000398559 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
TMF1-201ENST00000398559 LCE4AQ5TA78 99 aa2.96□□□□□ -1.93
TMF1-201ENST00000398559 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.94
TMF1-201ENST00000398559 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
TMF1-201ENST00000398559 MUC2Q02817 5179 aa2.91□□□□□ -1.94
TMF1-201ENST00000398559 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
TMF1-201ENST00000398559 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
TMF1-201ENST00000398559 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
TMF1-201ENST00000398559 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
TMF1-201ENST00000398559 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
TMF1-201ENST00000398559 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
TMF1-201ENST00000398559 KMT2DO14686 5537 aa2.56□□□□□ -2
TMF1-201ENST00000398559 USH2AO75445 5202 aa2.55□□□□□ -2
TMF1-201ENST00000398559 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
TMF1-201ENST00000398559 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
TMF1-201ENST00000398559 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
TMF1-201ENST00000398559 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
TMF1-201ENST00000398559 DSTQ03001 7570 aaKnown RBP2.45□□□□□ -2.02
TMF1-201ENST00000398559 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
TMF1-201ENST00000398559 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.02
TMF1-201ENST00000398559 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
TMF1-201ENST00000398559 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
TMF1-201ENST00000398559 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
TMF1-201ENST00000398559 NEBP20929 6669 aa2.32□□□□□ -2.04
TMF1-201ENST00000398559 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
TMF1-201ENST00000398559 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
TMF1-201ENST00000398559 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
TMF1-201ENST00000398559 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
TMF1-201ENST00000398559 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
TMF1-201ENST00000398559 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
TMF1-201ENST00000398559 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
TMF1-201ENST00000398559 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
TMF1-201ENST00000398559 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
TMF1-201ENST00000398559 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
TMF1-201ENST00000398559 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
TMF1-201ENST00000398559 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
TMF1-201ENST00000398559 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
TMF1-201ENST00000398559 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
TMF1-201ENST00000398559 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
TMF1-201ENST00000398559 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
TMF1-201ENST00000398559 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
TMF1-201ENST00000398559 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
TMF1-201ENST00000398559 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
TMF1-201ENST00000398559 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
TMF1-201ENST00000398559 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
TMF1-201ENST00000398559 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 67.2 ms