RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
MSL1-202ENST00000398532 SPRR2DP22532 72 aa5.86□□□□□ -1.47
MSL1-202ENST00000398532 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
MSL1-202ENST00000398532 KRTAP19-7Q3SYF9 63 aa5.82□□□□□ -1.48
MSL1-202ENST00000398532 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
MSL1-202ENST00000398532 MT1MQ8N339 61 aa5.8□□□□□ -1.48
MSL1-202ENST00000398532 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
MSL1-202ENST00000398532 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
MSL1-202ENST00000398532 LCE3EQ5T5B0 92 aa5.7□□□□□ -1.5
MSL1-202ENST00000398532 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
MSL1-202ENST00000398532 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
MSL1-202ENST00000398532 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
MSL1-202ENST00000398532 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
MSL1-202ENST00000398532 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
MSL1-202ENST00000398532 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.53
MSL1-202ENST00000398532 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.53
MSL1-202ENST00000398532 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.53
MSL1-202ENST00000398532 USH2AO75445 5202 aa5.43□□□□□ -1.54
MSL1-202ENST00000398532 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
MSL1-202ENST00000398532 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
MSL1-202ENST00000398532 MT3P25713 68 aa5.38□□□□□ -1.55
MSL1-202ENST00000398532 KMT2DO14686 5537 aa5.35□□□□□ -1.55
MSL1-202ENST00000398532 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
MSL1-202ENST00000398532 MT1AP04731 61 aa5.31□□□□□ -1.56
MSL1-202ENST00000398532 PRM1P04553 51 aa5.3□□□□□ -1.56
MSL1-202ENST00000398532 MT4P47944 62 aa5.27□□□□□ -1.57
MSL1-202ENST00000398532 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
MSL1-202ENST00000398532 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
MSL1-202ENST00000398532 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
MSL1-202ENST00000398532 MUC12Q9UKN1 5478 aa5.05□□□□□ -1.6
MSL1-202ENST00000398532 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
MSL1-202ENST00000398532 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
MSL1-202ENST00000398532 LCE1BQ5T7P3 118 aa4.99□□□□□ -1.61
MSL1-202ENST00000398532 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
MSL1-202ENST00000398532 SSPOA2VEC9 5147 aa4.92□□□□□ -1.62
MSL1-202ENST00000398532 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
MSL1-202ENST00000398532 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
MSL1-202ENST00000398532 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
MSL1-202ENST00000398532 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
MSL1-202ENST00000398532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
MSL1-202ENST00000398532 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
MSL1-202ENST00000398532 LCE4AQ5TA78 99 aa4.59□□□□□ -1.67
MSL1-202ENST00000398532 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
MSL1-202ENST00000398532 KRTAP5-9P26371 169 aa4.53□□□□□ -1.69
MSL1-202ENST00000398532 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
MSL1-202ENST00000398532 MUC19Q7Z5P9 8384 aa4.38□□□□□ -1.71
MSL1-202ENST00000398532 NEBP20929 6669 aa4.32□□□□□ -1.72
MSL1-202ENST00000398532 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
MSL1-202ENST00000398532 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
MSL1-202ENST00000398532 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
MSL1-202ENST00000398532 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
MSL1-202ENST00000398532 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
MSL1-202ENST00000398532 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
MSL1-202ENST00000398532 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
MSL1-202ENST00000398532 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
MSL1-202ENST00000398532 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
MSL1-202ENST00000398532 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
MSL1-202ENST00000398532 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
MSL1-202ENST00000398532 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
MSL1-202ENST00000398532 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
MSL1-202ENST00000398532 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
MSL1-202ENST00000398532 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
MSL1-202ENST00000398532 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
MSL1-202ENST00000398532 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
MSL1-202ENST00000398532 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
MSL1-202ENST00000398532 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
MSL1-202ENST00000398532 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
MSL1-202ENST00000398532 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
MSL1-202ENST00000398532 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
MSL1-202ENST00000398532 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
MSL1-202ENST00000398532 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
MSL1-202ENST00000398532 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
MSL1-202ENST00000398532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
MSL1-202ENST00000398532 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
MSL1-202ENST00000398532 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
MSL1-202ENST00000398532 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
MSL1-202ENST00000398532 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms