RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 HSPG2P98160 4391 aa0.1□□□□□ -2.39
CD47-203ENST00000398258 LRP1Q07954 4544 aaKnown RBP0.09□□□□□ -2.39
CD47-203ENST00000398258 A0A1B0GUT8 65 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 H3BQ15 152 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 LEPROTL1O95214 131 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 MT1XP80297 61 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 PEA15Q15121 130 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 NREPQ16612 68 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 C9orf62Q8N4C0 152 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 MT1LQ93083 61 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 LYSTQ99698 3801 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 CMYA5Q8N3K9 4069 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 KMT2AQ03164 3969 aa0.09□□□□□ -2.4
CD47-203ENST00000398258 HUWE1Q7Z6Z7 4374 aaKnown RBP0.08□□□□□ -2.4
CD47-203ENST00000398258 DYNC2H1Q8NCM8 4307 aaKnown RBP0.08□□□□□ -2.4
CD47-203ENST00000398258 FAT2Q9NYQ8 4349 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 UMAD1C9J7I0 102 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 H0YGX0 51 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 SMIM13P0DJ93 91 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 KRTDAPP60985 99 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 TOMM5Q8N4H5 51 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 C14orf144Q96I85 54 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 VAMP8Q9BV40 100 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 UBL5Q9BZL1 73 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 Q9H521 79 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 DNAH7Q8WXX0 4024 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 PLECQ15149 4684 aaKnown RBP0.08□□□□□ -2.4
CD47-203ENST00000398258 VPS13BQ7Z7G8 4022 aa0.08□□□□□ -2.4
CD47-203ENST00000398258 MPC2O95563 127 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 IGLC3P0DOY3 106 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 CRIP1P50238 77 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 RPL39P62891 51 aaKnown RBP0.07□□□□□ -2.4
CD47-203ENST00000398258 KRTAP19-7Q3SYF9 63 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 RPL39LQ96EH5 51 aaKnown RBP0.07□□□□□ -2.4
CD47-203ENST00000398258 DNAH11Q96DT5 4516 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 DNAH10Q8IVF4 4471 aa0.07□□□□□ -2.4
CD47-203ENST00000398258 APOBP04114 4563 aaKnown RBP0.06□□□□□ -2.4
CD47-203ENST00000398258 PKHD1L1Q86WI1 4243 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 KANTRA0A1W2PQU2 76 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 H3BUT2 72 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 DEFB107AQ8IZN7 70 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 GNG13Q9P2W3 67 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 DNAH9Q9NYC9 4486 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 STARD9Q9P2P6 4700 aa0.06□□□□□ -2.4
CD47-203ENST00000398258 LPAP08519 4548 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 IGIPA6NJ69 53 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 ATXN8Q156A1 80 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 LINC00308Q8TCZ7 52 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 DNAH5Q8TE73 4624 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 PKD1P98161 4303 aa0.05□□□□□ -2.4
CD47-203ENST00000398258 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 FAT1Q14517 4588 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 A0A1B0GU69 56 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 H0Y9P7 68 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 ADIRFQ15847 76 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 ATP5EP2Q5VTU8 51 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 DNAH6Q9C0G6 4158 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 TNXBP22105 4242 aa0.04□□□□□ -2.4
CD47-203ENST00000398258 MUC17Q685J3 4493 aa0.03□□□□□ -2.4
CD47-203ENST00000398258 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
CD47-203ENST00000398258 GNGT1P63211 74 aa0.03□□□□□ -2.4
CD47-203ENST00000398258 PMCHL2Q9BQD1 86 aa0.03□□□□□ -2.4
CD47-203ENST00000398258 FLGP20930 4061 aaPredicted RBP0.03□□□□□ -2.4
CD47-203ENST00000398258 VPS13DQ5THJ4 4388 aa0.03□□□□□ -2.41
CD47-203ENST00000398258 DNAH8Q96JB1 4490 aa0.02□□□□□ -2.41
CD47-203ENST00000398258 DNAH2Q9P225 4427 aa0.02□□□□□ -2.41
CD47-203ENST00000398258 PMCHL1Q16048 86 aa0.01□□□□□ -2.41
CD47-203ENST00000398258 M0R143 59 aa0□□□□□ -2.41
CD47-203ENST00000398258 COL5A1-AS1Q5SY13 56 aa0□□□□□ -2.41
CD47-203ENST00000398258 DNAH17Q9UFH2 4485 aa-0□□□□□ -2.41
CD47-203ENST00000398258 PRM1P04553 51 aa-0.01□□□□□ -2.41
CD47-203ENST00000398258 ETDBQ3ZM63 59 aa-0.01□□□□□ -2.41
CD47-203ENST00000398258 C18orf32Q8TCD1 76 aa-0.01□□□□□ -2.41
CD47-203ENST00000398258 LINC00643Q86TS7 51 aa-0.04□□□□□ -2.42
CD47-203ENST00000398258 PYY3Q5JQD4 70 aa-0.08□□□□□ -2.42
Retrieved 78 of 20,778 RNA–protein pairs in 231.1 ms