RNA–Protein interactions for RNA: ENST00000398238.8

NSF-201, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSF, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSF-201ENST00000398238 MT1LQ93083 61 aa4.76□□□□□ -1.65
NSF-201ENST00000398238 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
NSF-201ENST00000398238 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
NSF-201ENST00000398238 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
NSF-201ENST00000398238 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
NSF-201ENST00000398238 MT1GP13640 62 aa4.56□□□□□ -1.68
NSF-201ENST00000398238 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
NSF-201ENST00000398238 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
NSF-201ENST00000398238 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
NSF-201ENST00000398238 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
NSF-201ENST00000398238 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
NSF-201ENST00000398238 MT1MQ8N339 61 aa4.46□□□□□ -1.7
NSF-201ENST00000398238 INE1O15225 51 aa4.45□□□□□ -1.7
NSF-201ENST00000398238 KRTAP19-3Q7Z4W3 81 aa4.42□□□□□ -1.7
NSF-201ENST00000398238 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
NSF-201ENST00000398238 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
NSF-201ENST00000398238 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
NSF-201ENST00000398238 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
NSF-201ENST00000398238 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
NSF-201ENST00000398238 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
NSF-201ENST00000398238 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
NSF-201ENST00000398238 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
NSF-201ENST00000398238 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
NSF-201ENST00000398238 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.74
NSF-201ENST00000398238 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
NSF-201ENST00000398238 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
NSF-201ENST00000398238 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
NSF-201ENST00000398238 NEBP20929 6669 aa4.03□□□□□ -1.77
NSF-201ENST00000398238 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
NSF-201ENST00000398238 SPRR2EP22531 72 aa3.95□□□□□ -1.78
NSF-201ENST00000398238 SPRR2BP35325 72 aa3.95□□□□□ -1.78
NSF-201ENST00000398238 SPRR2AP35326 72 aa3.95□□□□□ -1.78
NSF-201ENST00000398238 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
NSF-201ENST00000398238 MT1AP04731 61 aa3.89□□□□□ -1.79
NSF-201ENST00000398238 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
NSF-201ENST00000398238 SPRR2DP22532 72 aa3.75□□□□□ -1.81
NSF-201ENST00000398238 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
NSF-201ENST00000398238 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
NSF-201ENST00000398238 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
NSF-201ENST00000398238 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
NSF-201ENST00000398238 PRM1P04553 51 aa3.63□□□□□ -1.83
NSF-201ENST00000398238 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
NSF-201ENST00000398238 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
NSF-201ENST00000398238 MT4P47944 62 aa3.48□□□□□ -1.85
NSF-201ENST00000398238 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
NSF-201ENST00000398238 MT3P25713 68 aa3.45□□□□□ -1.86
NSF-201ENST00000398238 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
NSF-201ENST00000398238 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
NSF-201ENST00000398238 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
NSF-201ENST00000398238 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
NSF-201ENST00000398238 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
NSF-201ENST00000398238 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
NSF-201ENST00000398238 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
NSF-201ENST00000398238 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
NSF-201ENST00000398238 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
NSF-201ENST00000398238 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
NSF-201ENST00000398238 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
NSF-201ENST00000398238 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
NSF-201ENST00000398238 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
NSF-201ENST00000398238 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
NSF-201ENST00000398238 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.96
NSF-201ENST00000398238 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
NSF-201ENST00000398238 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
NSF-201ENST00000398238 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
NSF-201ENST00000398238 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NSF-201ENST00000398238 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
NSF-201ENST00000398238 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
NSF-201ENST00000398238 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
NSF-201ENST00000398238 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
NSF-201ENST00000398238 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
NSF-201ENST00000398238 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
NSF-201ENST00000398238 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
NSF-201ENST00000398238 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
NSF-201ENST00000398238 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
NSF-201ENST00000398238 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
NSF-201ENST00000398238 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
NSF-201ENST00000398238 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 81.5 ms