RNA–Protein interactions for RNA: ENST00000397799.1

COL8A2-202, Transcript of collagen type VIII alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL8A2, Length 4,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2-202ENST00000397799 MT1LQ93083 61 aa5.74□□□□□ -1.49
COL8A2-202ENST00000397799 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
COL8A2-202ENST00000397799 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
COL8A2-202ENST00000397799 LCE3BQ5TA77 95 aa5.6□□□□□ -1.51
COL8A2-202ENST00000397799 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
COL8A2-202ENST00000397799 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
COL8A2-202ENST00000397799 MT1MQ8N339 61 aa5.54□□□□□ -1.52
COL8A2-202ENST00000397799 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
COL8A2-202ENST00000397799 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
COL8A2-202ENST00000397799 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
COL8A2-202ENST00000397799 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
COL8A2-202ENST00000397799 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
COL8A2-202ENST00000397799 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
COL8A2-202ENST00000397799 USH2AO75445 5202 aa5.22□□□□□ -1.57
COL8A2-202ENST00000397799 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
COL8A2-202ENST00000397799 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
COL8A2-202ENST00000397799 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
COL8A2-202ENST00000397799 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
COL8A2-202ENST00000397799 MT4P47944 62 aa5.14□□□□□ -1.59
COL8A2-202ENST00000397799 MT3P25713 68 aa5.14□□□□□ -1.59
COL8A2-202ENST00000397799 MT1AP04731 61 aa5.08□□□□□ -1.6
COL8A2-202ENST00000397799 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
COL8A2-202ENST00000397799 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
COL8A2-202ENST00000397799 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
COL8A2-202ENST00000397799 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
COL8A2-202ENST00000397799 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
COL8A2-202ENST00000397799 KMT2DO14686 5537 aa4.96□□□□□ -1.61
COL8A2-202ENST00000397799 KRTAP2-3P0C7H8 128 aa4.92□□□□□ -1.62
COL8A2-202ENST00000397799 KRTAP2-4Q9BYR9 128 aa4.92□□□□□ -1.62
COL8A2-202ENST00000397799 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
COL8A2-202ENST00000397799 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
COL8A2-202ENST00000397799 SSPOA2VEC9 5147 aa4.82□□□□□ -1.64
COL8A2-202ENST00000397799 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
COL8A2-202ENST00000397799 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
COL8A2-202ENST00000397799 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
COL8A2-202ENST00000397799 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
COL8A2-202ENST00000397799 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
COL8A2-202ENST00000397799 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
COL8A2-202ENST00000397799 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
COL8A2-202ENST00000397799 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
COL8A2-202ENST00000397799 LCE1BQ5T7P3 118 aa4.66□□□□□ -1.66
COL8A2-202ENST00000397799 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
COL8A2-202ENST00000397799 PRM1P04553 51 aa4.62□□□□□ -1.67
COL8A2-202ENST00000397799 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
COL8A2-202ENST00000397799 NEBP20929 6669 aa4.48□□□□□ -1.69
COL8A2-202ENST00000397799 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
COL8A2-202ENST00000397799 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
COL8A2-202ENST00000397799 KRTAP20-2Q3LI61 65 aa4.15□□□□□ -1.74
COL8A2-202ENST00000397799 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
COL8A2-202ENST00000397799 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
COL8A2-202ENST00000397799 KRTAP5-4Q6L8H1 288 aa3.94□□□□□ -1.78
COL8A2-202ENST00000397799 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
COL8A2-202ENST00000397799 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
COL8A2-202ENST00000397799 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
COL8A2-202ENST00000397799 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
COL8A2-202ENST00000397799 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
COL8A2-202ENST00000397799 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.81
COL8A2-202ENST00000397799 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
COL8A2-202ENST00000397799 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
COL8A2-202ENST00000397799 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
COL8A2-202ENST00000397799 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
COL8A2-202ENST00000397799 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
COL8A2-202ENST00000397799 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
COL8A2-202ENST00000397799 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
COL8A2-202ENST00000397799 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
COL8A2-202ENST00000397799 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
COL8A2-202ENST00000397799 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
COL8A2-202ENST00000397799 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
COL8A2-202ENST00000397799 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
COL8A2-202ENST00000397799 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
COL8A2-202ENST00000397799 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
COL8A2-202ENST00000397799 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
COL8A2-202ENST00000397799 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
COL8A2-202ENST00000397799 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
COL8A2-202ENST00000397799 PHGR1C9JFL3 82 aa2.53□□□□□ -2
COL8A2-202ENST00000397799 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
COL8A2-202ENST00000397799 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 161.8 ms