RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MT1LQ93083 61 aa2.85□□□□□ -1.95
PTPRD-204ENST00000397606 USH2AO75445 5202 aa2.83□□□□□ -1.96
PTPRD-204ENST00000397606 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
PTPRD-204ENST00000397606 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
PTPRD-204ENST00000397606 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
PTPRD-204ENST00000397606 MT1MQ8N339 61 aa2.76□□□□□ -1.97
PTPRD-204ENST00000397606 KRTAP9-7A8MTY7 169 aa2.75□□□□□ -1.97
PTPRD-204ENST00000397606 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
PTPRD-204ENST00000397606 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
PTPRD-204ENST00000397606 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
PTPRD-204ENST00000397606 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
PTPRD-204ENST00000397606 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
PTPRD-204ENST00000397606 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
PTPRD-204ENST00000397606 FCGBPQ9Y6R7 5405 aaPredicted RBP2.65□□□□□ -1.99
PTPRD-204ENST00000397606 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
PTPRD-204ENST00000397606 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
PTPRD-204ENST00000397606 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
PTPRD-204ENST00000397606 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -2
PTPRD-204ENST00000397606 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PTPRD-204ENST00000397606 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
PTPRD-204ENST00000397606 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
PTPRD-204ENST00000397606 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
PTPRD-204ENST00000397606 KRTAP5-9P26371 169 aa2.56□□□□□ -2
PTPRD-204ENST00000397606 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
PTPRD-204ENST00000397606 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
PTPRD-204ENST00000397606 MT4P47944 62 aa2.53□□□□□ -2
PTPRD-204ENST00000397606 KMT2DO14686 5537 aa2.51□□□□□ -2.01
PTPRD-204ENST00000397606 MT1AP04731 61 aa2.5□□□□□ -2.01
PTPRD-204ENST00000397606 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
PTPRD-204ENST00000397606 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
PTPRD-204ENST00000397606 MT3P25713 68 aa2.48□□□□□ -2.01
PTPRD-204ENST00000397606 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
PTPRD-204ENST00000397606 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
PTPRD-204ENST00000397606 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
PTPRD-204ENST00000397606 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
PTPRD-204ENST00000397606 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
PTPRD-204ENST00000397606 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.02
PTPRD-204ENST00000397606 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
PTPRD-204ENST00000397606 NEBP20929 6669 aa2.39□□□□□ -2.03
PTPRD-204ENST00000397606 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
PTPRD-204ENST00000397606 KRTAP4-9Q9BYQ8 210 aa2.34□□□□□ -2.03
PTPRD-204ENST00000397606 MDN1Q9NU22 5596 aa2.34□□□□□ -2.04
PTPRD-204ENST00000397606 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
PTPRD-204ENST00000397606 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
PTPRD-204ENST00000397606 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
PTPRD-204ENST00000397606 LCE1DQ5T752 114 aa2.24□□□□□ -2.05
PTPRD-204ENST00000397606 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PTPRD-204ENST00000397606 KRTAP4-6Q9BYQ5 205 aa2.18□□□□□ -2.06
PTPRD-204ENST00000397606 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
PTPRD-204ENST00000397606 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
PTPRD-204ENST00000397606 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
PTPRD-204ENST00000397606 PRM1P04553 51 aa2.07□□□□□ -2.08
PTPRD-204ENST00000397606 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
PTPRD-204ENST00000397606 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
PTPRD-204ENST00000397606 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
PTPRD-204ENST00000397606 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
PTPRD-204ENST00000397606 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
PTPRD-204ENST00000397606 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
PTPRD-204ENST00000397606 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
PTPRD-204ENST00000397606 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
PTPRD-204ENST00000397606 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
PTPRD-204ENST00000397606 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
PTPRD-204ENST00000397606 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
PTPRD-204ENST00000397606 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
PTPRD-204ENST00000397606 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
PTPRD-204ENST00000397606 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
PTPRD-204ENST00000397606 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.16
PTPRD-204ENST00000397606 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
PTPRD-204ENST00000397606 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
PTPRD-204ENST00000397606 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
PTPRD-204ENST00000397606 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PTPRD-204ENST00000397606 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
PTPRD-204ENST00000397606 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
PTPRD-204ENST00000397606 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
PTPRD-204ENST00000397606 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
PTPRD-204ENST00000397606 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
PTPRD-204ENST00000397606 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 104.7 ms