RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 KRTAP19-3Q7Z4W3 81 aa9.71□□□□□ -0.85
CPNE1-203ENST00000397442 LCE1AQ5T7P2 110 aa9.67□□□□□ -0.86
CPNE1-203ENST00000397442 MDN1Q9NU22 5596 aa9.62□□□□□ -0.87
CPNE1-203ENST00000397442 LCE5AQ5TCM9 118 aa9.6□□□□□ -0.87
CPNE1-203ENST00000397442 MT1GP13640 62 aa9.59□□□□□ -0.87
CPNE1-203ENST00000397442 SPRR2EP22531 72 aa9.59□□□□□ -0.87
CPNE1-203ENST00000397442 SPRR2BP35325 72 aa9.59□□□□□ -0.87
CPNE1-203ENST00000397442 SPRR2AP35326 72 aa9.59□□□□□ -0.87
CPNE1-203ENST00000397442 KRTAP19-4Q3LI73 84 aa9.55□□□□□ -0.88
CPNE1-203ENST00000397442 LCE3CQ5T5A8 94 aa9.52□□□□□ -0.89
CPNE1-203ENST00000397442 MT1MQ8N339 61 aa9.49□□□□□ -0.89
CPNE1-203ENST00000397442 KRTAP4-7Q9BYR0 210 aa9.49□□□□□ -0.89
CPNE1-203ENST00000397442 NEBP20929 6669 aa9.33□□□□□ -0.92
CPNE1-203ENST00000397442 KRTAP4-3Q9BYR4 195 aa9.32□□□□□ -0.92
CPNE1-203ENST00000397442 SPRR5A0A1B0GTR4 108 aa9.26□□□□□ -0.93
CPNE1-203ENST00000397442 SPRR2DP22532 72 aa9.24□□□□□ -0.93
CPNE1-203ENST00000397442 DSTQ03001 7570 aaKnown RBP9.08□□□□□ -0.96
CPNE1-203ENST00000397442 KRTAP9-6A8MVA2 160 aa9.06□□□□□ -0.96
CPNE1-203ENST00000397442 LOC100996750A0A140TA64 210 aa8.92□□□□□ -0.98
CPNE1-203ENST00000397442 LCE3BQ5TA77 95 aa8.91□□□□□ -0.98
CPNE1-203ENST00000397442 KRTAP2-3P0C7H8 128 aa8.75□□□□□ -1.01
CPNE1-203ENST00000397442 KRTAP2-4Q9BYR9 128 aa8.75□□□□□ -1.01
CPNE1-203ENST00000397442 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
CPNE1-203ENST00000397442 KRTAP20-1Q3LI63 56 aa8.67□□□□□ -1.02
CPNE1-203ENST00000397442 KRTAP5-5Q701N2 237 aaPredicted RBP8.62□□□□□ -1.03
CPNE1-203ENST00000397442 KRTAP2-2Q9BYT5 123 aa8.56□□□□□ -1.04
CPNE1-203ENST00000397442 KRTAP2-1Q9BYU5 128 aa8.56□□□□□ -1.04
CPNE1-203ENST00000397442 KRTAP5-4Q6L8H1 288 aa8.35□□□□□ -1.07
CPNE1-203ENST00000397442 MT1AP04731 61 aa8.34□□□□□ -1.08
CPNE1-203ENST00000397442 NDUFAF8A1L188 74 aa8.32□□□□□ -1.08
CPNE1-203ENST00000397442 KRTAP6-1Q3LI64 71 aa8.28□□□□□ -1.08
CPNE1-203ENST00000397442 LCE4AQ5TA78 99 aa8.21□□□□□ -1.1
CPNE1-203ENST00000397442 SYNE1Q8NF91 8797 aaKnown RBP8.1□□□□□ -1.11
CPNE1-203ENST00000397442 KRTAP4-9Q9BYQ8 210 aa8.04□□□□□ -1.12
CPNE1-203ENST00000397442 MT4P47944 62 aa8.03□□□□□ -1.12
CPNE1-203ENST00000397442 KRTAP12-4P60329 112 aa7.99□□□□□ -1.13
CPNE1-203ENST00000397442 KRTAP4-6Q9BYQ5 205 aa7.98□□□□□ -1.13
CPNE1-203ENST00000397442 LCE1DQ5T752 114 aa7.97□□□□□ -1.13
CPNE1-203ENST00000397442 KRTAP9-4Q9BYQ2 154 aa7.95□□□□□ -1.14
CPNE1-203ENST00000397442 HMCN1Q96RW7 5635 aa7.81□□□□□ -1.16
CPNE1-203ENST00000397442 KRTAP20-2Q3LI61 65 aa7.8□□□□□ -1.16
CPNE1-203ENST00000397442 KRTAP6-2Q3LI66 62 aa7.67□□□□□ -1.18
CPNE1-203ENST00000397442 KRTAP5-3Q6L8H2 238 aa7.55□□□□□ -1.2
CPNE1-203ENST00000397442 MT3P25713 68 aa7.54□□□□□ -1.2
CPNE1-203ENST00000397442 KRTAP5-2Q701N4 177 aa7.54□□□□□ -1.2
CPNE1-203ENST00000397442 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
CPNE1-203ENST00000397442 LCE3DQ9BYE3 92 aa7.09□□□□□ -1.27
CPNE1-203ENST00000397442 AHNAK2Q8IVF2 5795 aa7.02□□□□□ -1.28
CPNE1-203ENST00000397442 OBSCNQ5VST9 7968 aa7.01□□□□□ -1.29
CPNE1-203ENST00000397442 LCE3EQ5T5B0 92 aa6.85□□□□□ -1.31
CPNE1-203ENST00000397442 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
CPNE1-203ENST00000397442 INE1O15225 51 aa6.82□□□□□ -1.32
CPNE1-203ENST00000397442 KRTAP5-10Q6L8G5 202 aa6.78□□□□□ -1.32
CPNE1-203ENST00000397442 H3BS24 57 aa6.72□□□□□ -1.33
CPNE1-203ENST00000397442 LCE1EQ5T753 118 aa6.64□□□□□ -1.35
CPNE1-203ENST00000397442 KRTAP5-8O75690 187 aa6.59□□□□□ -1.35
CPNE1-203ENST00000397442 KRTAP5-1Q6L8H4 278 aa6.56□□□□□ -1.36
CPNE1-203ENST00000397442 GPR98Q8WXG9 6306 aa6.53□□□□□ -1.36
CPNE1-203ENST00000397442 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
CPNE1-203ENST00000397442 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
CPNE1-203ENST00000397442 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
CPNE1-203ENST00000397442 LCE1BQ5T7P3 118 aa6.2□□□□□ -1.42
CPNE1-203ENST00000397442 LCE1CQ5T751 118 aa6.19□□□□□ -1.42
CPNE1-203ENST00000397442 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
CPNE1-203ENST00000397442 PRM1P04553 51 aa5.86□□□□□ -1.47
CPNE1-203ENST00000397442 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.78□□□□□ -1.48
CPNE1-203ENST00000397442 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
CPNE1-203ENST00000397442 KRTAP5-11Q6L8G4 156 aa5.49□□□□□ -1.53
CPNE1-203ENST00000397442 KRTAP21-2Q3LI59 83 aa5.45□□□□□ -1.54
CPNE1-203ENST00000397442 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
CPNE1-203ENST00000397442 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
CPNE1-203ENST00000397442 LCE1FQ5T754 118 aa5□□□□□ -1.61
CPNE1-203ENST00000397442 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
CPNE1-203ENST00000397442 PHGR1C9JFL3 82 aa4.73□□□□□ -1.65
CPNE1-203ENST00000397442 MUC19Q7Z5P9 8384 aa4.21□□□□□ -1.74
CPNE1-203ENST00000397442 KRTAP21-1Q3LI58 79 aa3.54□□□□□ -1.84
CPNE1-203ENST00000397442 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 67.2 ms