RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SPRR2EP22531 72 aa8.43□□□□□ -1.06
TSPAN4-202ENST00000397396 SPRR2BP35325 72 aa8.43□□□□□ -1.06
TSPAN4-202ENST00000397396 SPRR2AP35326 72 aa8.43□□□□□ -1.06
TSPAN4-202ENST00000397396 KRTAP19-3Q7Z4W3 81 aa8.42□□□□□ -1.06
TSPAN4-202ENST00000397396 MT1LQ93083 61 aa8.42□□□□□ -1.06
TSPAN4-202ENST00000397396 LCE1AQ5T7P2 110 aa8.41□□□□□ -1.06
TSPAN4-202ENST00000397396 SVIPQ8NHG7 77 aa8.41□□□□□ -1.06
TSPAN4-202ENST00000397396 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
TSPAN4-202ENST00000397396 MT1GP13640 62 aa8.33□□□□□ -1.08
TSPAN4-202ENST00000397396 LCE5AQ5TCM9 118 aa8.29□□□□□ -1.08
TSPAN4-202ENST00000397396 MT1MQ8N339 61 aa8.17□□□□□ -1.1
TSPAN4-202ENST00000397396 SPRR2DP22532 72 aa8.15□□□□□ -1.1
TSPAN4-202ENST00000397396 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
TSPAN4-202ENST00000397396 LCE3CQ5T5A8 94 aa8.11□□□□□ -1.11
TSPAN4-202ENST00000397396 KRTAP2-3P0C7H8 128 aa8.03□□□□□ -1.12
TSPAN4-202ENST00000397396 KRTAP2-4Q9BYR9 128 aa8.03□□□□□ -1.12
TSPAN4-202ENST00000397396 KRTAP4-7Q9BYR0 210 aa7.97□□□□□ -1.13
TSPAN4-202ENST00000397396 KRTAP4-3Q9BYR4 195 aa7.87□□□□□ -1.15
TSPAN4-202ENST00000397396 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
TSPAN4-202ENST00000397396 KRTAP2-2Q9BYT5 123 aa7.8□□□□□ -1.16
TSPAN4-202ENST00000397396 KRTAP2-1Q9BYU5 128 aa7.8□□□□□ -1.16
TSPAN4-202ENST00000397396 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
TSPAN4-202ENST00000397396 DSTQ03001 7570 aaKnown RBP7.71□□□□□ -1.17
TSPAN4-202ENST00000397396 KRTAP9-6A8MVA2 160 aa7.54□□□□□ -1.2
TSPAN4-202ENST00000397396 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
TSPAN4-202ENST00000397396 KRTAP5-5Q701N2 237 aaPredicted RBP7.4□□□□□ -1.22
TSPAN4-202ENST00000397396 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
TSPAN4-202ENST00000397396 LCE4AQ5TA78 99 aa7.29□□□□□ -1.24
TSPAN4-202ENST00000397396 KRTAP5-4Q6L8H1 288 aa7.27□□□□□ -1.24
TSPAN4-202ENST00000397396 MT1AP04731 61 aa7.21□□□□□ -1.26
TSPAN4-202ENST00000397396 KRTAP4-9Q9BYQ8 210 aa7.15□□□□□ -1.26
TSPAN4-202ENST00000397396 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
TSPAN4-202ENST00000397396 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
TSPAN4-202ENST00000397396 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
TSPAN4-202ENST00000397396 HMCN1Q96RW7 5635 aa7.02□□□□□ -1.29
TSPAN4-202ENST00000397396 MT4P47944 62 aa7.01□□□□□ -1.29
TSPAN4-202ENST00000397396 SYNE1Q8NF91 8797 aaKnown RBP6.93□□□□□ -1.3
TSPAN4-202ENST00000397396 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
TSPAN4-202ENST00000397396 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
TSPAN4-202ENST00000397396 KRTAP20-2Q3LI61 65 aa6.8□□□□□ -1.32
TSPAN4-202ENST00000397396 NDUFAF8A1L188 74 aa6.77□□□□□ -1.32
TSPAN4-202ENST00000397396 GPR98Q8WXG9 6306 aa6.67□□□□□ -1.34
TSPAN4-202ENST00000397396 AHNAK2Q8IVF2 5795 aa6.62□□□□□ -1.35
TSPAN4-202ENST00000397396 MT3P25713 68 aa6.57□□□□□ -1.36
TSPAN4-202ENST00000397396 KRTAP6-2Q3LI66 62 aa6.57□□□□□ -1.36
TSPAN4-202ENST00000397396 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
TSPAN4-202ENST00000397396 KRTAP5-2Q701N4 177 aa6.52□□□□□ -1.37
TSPAN4-202ENST00000397396 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
TSPAN4-202ENST00000397396 KRTAP5-7Q6L8G8 165 aa6.06□□□□□ -1.44
TSPAN4-202ENST00000397396 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
TSPAN4-202ENST00000397396 A0A0A0MQY5 61 aa5.99□□□□□ -1.45
TSPAN4-202ENST00000397396 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
TSPAN4-202ENST00000397396 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
TSPAN4-202ENST00000397396 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
TSPAN4-202ENST00000397396 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
TSPAN4-202ENST00000397396 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
TSPAN4-202ENST00000397396 INE1O15225 51 aa5.71□□□□□ -1.5
TSPAN4-202ENST00000397396 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
TSPAN4-202ENST00000397396 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
TSPAN4-202ENST00000397396 MUC5BQ9HC84 5762 aaPredicted RBP5.43□□□□□ -1.54
TSPAN4-202ENST00000397396 LCE1CQ5T751 118 aa5.39□□□□□ -1.55
TSPAN4-202ENST00000397396 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
TSPAN4-202ENST00000397396 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
TSPAN4-202ENST00000397396 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
TSPAN4-202ENST00000397396 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
TSPAN4-202ENST00000397396 H3BS24 57 aa5.22□□□□□ -1.57
TSPAN4-202ENST00000397396 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
TSPAN4-202ENST00000397396 PRM1P04553 51 aa4.87□□□□□ -1.63
TSPAN4-202ENST00000397396 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
TSPAN4-202ENST00000397396 KRTAP21-2Q3LI59 83 aa4.63□□□□□ -1.67
TSPAN4-202ENST00000397396 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
TSPAN4-202ENST00000397396 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
TSPAN4-202ENST00000397396 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
TSPAN4-202ENST00000397396 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
TSPAN4-202ENST00000397396 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
TSPAN4-202ENST00000397396 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
TSPAN4-202ENST00000397396 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 146.5 ms