RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
MCF2L-205ENST00000397017 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
MCF2L-205ENST00000397017 MT1EP04732 61 aa5.26□□□□□ -1.57
MCF2L-205ENST00000397017 MT1GP13640 62 aa5.26□□□□□ -1.57
MCF2L-205ENST00000397017 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
MCF2L-205ENST00000397017 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
MCF2L-205ENST00000397017 MT1LQ93083 61 aa5.23□□□□□ -1.57
MCF2L-205ENST00000397017 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
MCF2L-205ENST00000397017 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
MCF2L-205ENST00000397017 SPRR2EP22531 72 aa5.17□□□□□ -1.58
MCF2L-205ENST00000397017 SPRR2BP35325 72 aa5.17□□□□□ -1.58
MCF2L-205ENST00000397017 SPRR2AP35326 72 aa5.17□□□□□ -1.58
MCF2L-205ENST00000397017 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
MCF2L-205ENST00000397017 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
MCF2L-205ENST00000397017 MT1MQ8N339 61 aa5.01□□□□□ -1.61
MCF2L-205ENST00000397017 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
MCF2L-205ENST00000397017 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
MCF2L-205ENST00000397017 SPRR2DP22532 72 aa4.95□□□□□ -1.62
MCF2L-205ENST00000397017 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
MCF2L-205ENST00000397017 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
MCF2L-205ENST00000397017 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
MCF2L-205ENST00000397017 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
MCF2L-205ENST00000397017 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
MCF2L-205ENST00000397017 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
MCF2L-205ENST00000397017 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
MCF2L-205ENST00000397017 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
MCF2L-205ENST00000397017 KRTAP12-4P60329 112 aa4.59□□□□□ -1.68
MCF2L-205ENST00000397017 MT4P47944 62 aa4.56□□□□□ -1.68
MCF2L-205ENST00000397017 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
MCF2L-205ENST00000397017 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
MCF2L-205ENST00000397017 KRTAP2-3P0C7H8 128 aa4.49□□□□□ -1.69
MCF2L-205ENST00000397017 KRTAP2-4Q9BYR9 128 aa4.49□□□□□ -1.69
MCF2L-205ENST00000397017 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
MCF2L-205ENST00000397017 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
MCF2L-205ENST00000397017 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
MCF2L-205ENST00000397017 MT1AP04731 61 aa4.41□□□□□ -1.7
MCF2L-205ENST00000397017 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
MCF2L-205ENST00000397017 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
MCF2L-205ENST00000397017 MT3P25713 68 aa4.24□□□□□ -1.73
MCF2L-205ENST00000397017 NEBP20929 6669 aa4.23□□□□□ -1.73
MCF2L-205ENST00000397017 MUC19Q7Z5P9 8384 aa4.19□□□□□ -1.74
MCF2L-205ENST00000397017 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
MCF2L-205ENST00000397017 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
MCF2L-205ENST00000397017 PRM1P04553 51 aa4.12□□□□□ -1.75
MCF2L-205ENST00000397017 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
MCF2L-205ENST00000397017 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
MCF2L-205ENST00000397017 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
MCF2L-205ENST00000397017 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
MCF2L-205ENST00000397017 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
MCF2L-205ENST00000397017 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
MCF2L-205ENST00000397017 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
MCF2L-205ENST00000397017 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
MCF2L-205ENST00000397017 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
MCF2L-205ENST00000397017 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
MCF2L-205ENST00000397017 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
MCF2L-205ENST00000397017 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
MCF2L-205ENST00000397017 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
MCF2L-205ENST00000397017 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
MCF2L-205ENST00000397017 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
MCF2L-205ENST00000397017 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
MCF2L-205ENST00000397017 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
MCF2L-205ENST00000397017 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
MCF2L-205ENST00000397017 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
MCF2L-205ENST00000397017 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
MCF2L-205ENST00000397017 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
MCF2L-205ENST00000397017 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
MCF2L-205ENST00000397017 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
MCF2L-205ENST00000397017 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
MCF2L-205ENST00000397017 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
MCF2L-205ENST00000397017 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
MCF2L-205ENST00000397017 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.98
MCF2L-205ENST00000397017 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
MCF2L-205ENST00000397017 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
MCF2L-205ENST00000397017 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
MCF2L-205ENST00000397017 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
MCF2L-205ENST00000397017 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
MCF2L-205ENST00000397017 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
MCF2L-205ENST00000397017 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 69.5 ms