RNA–Protein interactions for RNA: ENST00000396741.3

CYTH3-202, Transcript of cytohesin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CYTH3, Length 4,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-202ENST00000396741 SPRR2BP35325 72 aa4.91□□□□□ -1.62
CYTH3-202ENST00000396741 SPRR2AP35326 72 aa4.91□□□□□ -1.62
CYTH3-202ENST00000396741 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
CYTH3-202ENST00000396741 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
CYTH3-202ENST00000396741 KMT2DO14686 5537 aa4.87□□□□□ -1.63
CYTH3-202ENST00000396741 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
CYTH3-202ENST00000396741 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.64
CYTH3-202ENST00000396741 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
CYTH3-202ENST00000396741 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
CYTH3-202ENST00000396741 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
CYTH3-202ENST00000396741 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
CYTH3-202ENST00000396741 MT1MQ8N339 61 aa4.71□□□□□ -1.66
CYTH3-202ENST00000396741 SPRR2DP22532 72 aa4.71□□□□□ -1.66
CYTH3-202ENST00000396741 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
CYTH3-202ENST00000396741 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
CYTH3-202ENST00000396741 KRTAP9-2Q9BYQ4 174 aa4.55□□□□□ -1.68
CYTH3-202ENST00000396741 MUC12Q9UKN1 5478 aa4.54□□□□□ -1.68
CYTH3-202ENST00000396741 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
CYTH3-202ENST00000396741 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
CYTH3-202ENST00000396741 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
CYTH3-202ENST00000396741 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
CYTH3-202ENST00000396741 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.7
CYTH3-202ENST00000396741 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
CYTH3-202ENST00000396741 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
CYTH3-202ENST00000396741 MT4P47944 62 aa4.33□□□□□ -1.72
CYTH3-202ENST00000396741 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
CYTH3-202ENST00000396741 PRM1P04553 51 aa4.27□□□□□ -1.73
CYTH3-202ENST00000396741 MT3P25713 68 aa4.26□□□□□ -1.73
CYTH3-202ENST00000396741 MT1AP04731 61 aa4.25□□□□□ -1.73
CYTH3-202ENST00000396741 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CYTH3-202ENST00000396741 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
CYTH3-202ENST00000396741 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
CYTH3-202ENST00000396741 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
CYTH3-202ENST00000396741 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CYTH3-202ENST00000396741 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
CYTH3-202ENST00000396741 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
CYTH3-202ENST00000396741 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
CYTH3-202ENST00000396741 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
CYTH3-202ENST00000396741 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CYTH3-202ENST00000396741 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
CYTH3-202ENST00000396741 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
CYTH3-202ENST00000396741 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CYTH3-202ENST00000396741 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
CYTH3-202ENST00000396741 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
CYTH3-202ENST00000396741 NEBP20929 6669 aa3.63□□□□□ -1.83
CYTH3-202ENST00000396741 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
CYTH3-202ENST00000396741 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
CYTH3-202ENST00000396741 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
CYTH3-202ENST00000396741 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
CYTH3-202ENST00000396741 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
CYTH3-202ENST00000396741 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
CYTH3-202ENST00000396741 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
CYTH3-202ENST00000396741 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
CYTH3-202ENST00000396741 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CYTH3-202ENST00000396741 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
CYTH3-202ENST00000396741 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CYTH3-202ENST00000396741 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
CYTH3-202ENST00000396741 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CYTH3-202ENST00000396741 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.92
CYTH3-202ENST00000396741 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
CYTH3-202ENST00000396741 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
CYTH3-202ENST00000396741 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
CYTH3-202ENST00000396741 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
CYTH3-202ENST00000396741 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
CYTH3-202ENST00000396741 AHNAK2Q8IVF2 5795 aa2.85□□□□□ -1.95
CYTH3-202ENST00000396741 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
CYTH3-202ENST00000396741 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
CYTH3-202ENST00000396741 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
CYTH3-202ENST00000396741 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
CYTH3-202ENST00000396741 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
CYTH3-202ENST00000396741 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
CYTH3-202ENST00000396741 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
CYTH3-202ENST00000396741 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
CYTH3-202ENST00000396741 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
CYTH3-202ENST00000396741 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CYTH3-202ENST00000396741 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
CYTH3-202ENST00000396741 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 96.9 ms