RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
MKL1-202ENST00000396617 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
MKL1-202ENST00000396617 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
MKL1-202ENST00000396617 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
MKL1-202ENST00000396617 SPRR2DP22532 72 aa4.62□□□□□ -1.67
MKL1-202ENST00000396617 MT1MQ8N339 61 aa4.59□□□□□ -1.67
MKL1-202ENST00000396617 KRTAP12-4P60329 112 aa4.59□□□□□ -1.68
MKL1-202ENST00000396617 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
MKL1-202ENST00000396617 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
MKL1-202ENST00000396617 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
MKL1-202ENST00000396617 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
MKL1-202ENST00000396617 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
MKL1-202ENST00000396617 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
MKL1-202ENST00000396617 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
MKL1-202ENST00000396617 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
MKL1-202ENST00000396617 USH2AO75445 5202 aa4.39□□□□□ -1.71
MKL1-202ENST00000396617 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
MKL1-202ENST00000396617 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
MKL1-202ENST00000396617 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
MKL1-202ENST00000396617 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
MKL1-202ENST00000396617 KMT2DO14686 5537 aa4.23□□□□□ -1.73
MKL1-202ENST00000396617 MT1AP04731 61 aa4.21□□□□□ -1.74
MKL1-202ENST00000396617 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
MKL1-202ENST00000396617 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
MKL1-202ENST00000396617 MT3P25713 68 aa4.16□□□□□ -1.74
MKL1-202ENST00000396617 MT4P47944 62 aa4.16□□□□□ -1.74
MKL1-202ENST00000396617 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
MKL1-202ENST00000396617 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
MKL1-202ENST00000396617 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
MKL1-202ENST00000396617 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
MKL1-202ENST00000396617 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
MKL1-202ENST00000396617 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
MKL1-202ENST00000396617 SSPOA2VEC9 5147 aa4.05□□□□□ -1.76
MKL1-202ENST00000396617 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
MKL1-202ENST00000396617 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
MKL1-202ENST00000396617 PRM1P04553 51 aa3.99□□□□□ -1.77
MKL1-202ENST00000396617 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
MKL1-202ENST00000396617 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
MKL1-202ENST00000396617 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
MKL1-202ENST00000396617 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
MKL1-202ENST00000396617 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
MKL1-202ENST00000396617 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
MKL1-202ENST00000396617 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
MKL1-202ENST00000396617 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
MKL1-202ENST00000396617 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
MKL1-202ENST00000396617 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
MKL1-202ENST00000396617 NEBP20929 6669 aa3.6□□□□□ -1.83
MKL1-202ENST00000396617 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
MKL1-202ENST00000396617 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
MKL1-202ENST00000396617 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
MKL1-202ENST00000396617 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
MKL1-202ENST00000396617 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
MKL1-202ENST00000396617 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
MKL1-202ENST00000396617 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
MKL1-202ENST00000396617 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
MKL1-202ENST00000396617 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
MKL1-202ENST00000396617 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
MKL1-202ENST00000396617 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
MKL1-202ENST00000396617 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
MKL1-202ENST00000396617 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
MKL1-202ENST00000396617 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
MKL1-202ENST00000396617 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
MKL1-202ENST00000396617 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
MKL1-202ENST00000396617 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
MKL1-202ENST00000396617 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
MKL1-202ENST00000396617 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
MKL1-202ENST00000396617 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
MKL1-202ENST00000396617 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
MKL1-202ENST00000396617 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
MKL1-202ENST00000396617 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
MKL1-202ENST00000396617 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
MKL1-202ENST00000396617 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
MKL1-202ENST00000396617 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
MKL1-202ENST00000396617 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
MKL1-202ENST00000396617 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
MKL1-202ENST00000396617 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
MKL1-202ENST00000396617 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 122.6 ms