RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
TCEA1-201ENST00000396401 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
TCEA1-201ENST00000396401 MT1EP04732 61 aa6.01□□□□□ -1.45
TCEA1-201ENST00000396401 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
TCEA1-201ENST00000396401 MT1GP13640 62 aa5.85□□□□□ -1.47
TCEA1-201ENST00000396401 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
TCEA1-201ENST00000396401 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
TCEA1-201ENST00000396401 MT1MQ8N339 61 aa5.61□□□□□ -1.51
TCEA1-201ENST00000396401 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
TCEA1-201ENST00000396401 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
TCEA1-201ENST00000396401 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
TCEA1-201ENST00000396401 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
TCEA1-201ENST00000396401 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
TCEA1-201ENST00000396401 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
TCEA1-201ENST00000396401 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
TCEA1-201ENST00000396401 MACF1Q9UPN3 7388 aaKnown RBP5.51□□□□□ -1.53
TCEA1-201ENST00000396401 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
TCEA1-201ENST00000396401 MDN1Q9NU22 5596 aa5.46□□□□□ -1.53
TCEA1-201ENST00000396401 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
TCEA1-201ENST00000396401 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
TCEA1-201ENST00000396401 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
TCEA1-201ENST00000396401 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
TCEA1-201ENST00000396401 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
TCEA1-201ENST00000396401 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
TCEA1-201ENST00000396401 PRM1P04553 51 aa4.98□□□□□ -1.61
TCEA1-201ENST00000396401 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
TCEA1-201ENST00000396401 MT1AP04731 61 aa4.96□□□□□ -1.61
TCEA1-201ENST00000396401 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
TCEA1-201ENST00000396401 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
TCEA1-201ENST00000396401 SPRR2EP22531 72 aa4.81□□□□□ -1.64
TCEA1-201ENST00000396401 SPRR2BP35325 72 aa4.81□□□□□ -1.64
TCEA1-201ENST00000396401 SPRR2AP35326 72 aa4.81□□□□□ -1.64
TCEA1-201ENST00000396401 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
TCEA1-201ENST00000396401 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
TCEA1-201ENST00000396401 KRTAP5-9P26371 169 aa4.66□□□□□ -1.66
TCEA1-201ENST00000396401 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
TCEA1-201ENST00000396401 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
TCEA1-201ENST00000396401 SPRR2DP22532 72 aa4.56□□□□□ -1.68
TCEA1-201ENST00000396401 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
TCEA1-201ENST00000396401 MT3P25713 68 aa4.45□□□□□ -1.7
TCEA1-201ENST00000396401 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
TCEA1-201ENST00000396401 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
TCEA1-201ENST00000396401 MT4P47944 62 aa4.23□□□□□ -1.73
TCEA1-201ENST00000396401 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
TCEA1-201ENST00000396401 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TCEA1-201ENST00000396401 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
TCEA1-201ENST00000396401 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
TCEA1-201ENST00000396401 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
TCEA1-201ENST00000396401 NEBP20929 6669 aa4.03□□□□□ -1.77
TCEA1-201ENST00000396401 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
TCEA1-201ENST00000396401 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
TCEA1-201ENST00000396401 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
TCEA1-201ENST00000396401 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
TCEA1-201ENST00000396401 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
TCEA1-201ENST00000396401 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
TCEA1-201ENST00000396401 KRTAP5-10Q6L8G5 202 aa3.65□□□□□ -1.82
TCEA1-201ENST00000396401 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
TCEA1-201ENST00000396401 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
TCEA1-201ENST00000396401 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
TCEA1-201ENST00000396401 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
TCEA1-201ENST00000396401 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
TCEA1-201ENST00000396401 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TCEA1-201ENST00000396401 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
TCEA1-201ENST00000396401 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
TCEA1-201ENST00000396401 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
TCEA1-201ENST00000396401 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
TCEA1-201ENST00000396401 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
TCEA1-201ENST00000396401 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
TCEA1-201ENST00000396401 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
TCEA1-201ENST00000396401 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
TCEA1-201ENST00000396401 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
TCEA1-201ENST00000396401 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
TCEA1-201ENST00000396401 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
TCEA1-201ENST00000396401 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
TCEA1-201ENST00000396401 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
TCEA1-201ENST00000396401 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TCEA1-201ENST00000396401 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms