RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
SNCA-203ENST00000394986 KRTAP2-3P0C7H8 128 aa7.33□□□□□ -1.24
SNCA-203ENST00000394986 KRTAP2-4Q9BYR9 128 aa7.33□□□□□ -1.24
SNCA-203ENST00000394986 KRTAP19-3Q7Z4W3 81 aa7.25□□□□□ -1.25
SNCA-203ENST00000394986 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.25
SNCA-203ENST00000394986 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
SNCA-203ENST00000394986 CDC42SE1Q9NRR8 79 aa7.16□□□□□ -1.26
SNCA-203ENST00000394986 MT1LQ93083 61 aa7.12□□□□□ -1.27
SNCA-203ENST00000394986 KRTAP2-2Q9BYT5 123 aa7.12□□□□□ -1.27
SNCA-203ENST00000394986 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
SNCA-203ENST00000394986 MT1GP13640 62 aa7.08□□□□□ -1.28
SNCA-203ENST00000394986 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
SNCA-203ENST00000394986 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SNCA-203ENST00000394986 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
SNCA-203ENST00000394986 MT1MQ8N339 61 aa7.01□□□□□ -1.29
SNCA-203ENST00000394986 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
SNCA-203ENST00000394986 ROMO1P60602 79 aa6.99□□□□□ -1.29
SNCA-203ENST00000394986 DSTQ03001 7570 aaKnown RBP6.98□□□□□ -1.29
SNCA-203ENST00000394986 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.31
SNCA-203ENST00000394986 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.31
SNCA-203ENST00000394986 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
SNCA-203ENST00000394986 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
SNCA-203ENST00000394986 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
SNCA-203ENST00000394986 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SNCA-203ENST00000394986 H3BS24 57 aa6.62□□□□□ -1.35
SNCA-203ENST00000394986 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
SNCA-203ENST00000394986 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.36
SNCA-203ENST00000394986 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
SNCA-203ENST00000394986 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
SNCA-203ENST00000394986 MT4P47944 62 aa6.47□□□□□ -1.37
SNCA-203ENST00000394986 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
SNCA-203ENST00000394986 KRTAP5-5Q701N2 237 aaPredicted RBP6.39□□□□□ -1.39
SNCA-203ENST00000394986 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
SNCA-203ENST00000394986 PMAIP1Q13794 54 aa6.34□□□□□ -1.39
SNCA-203ENST00000394986 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
SNCA-203ENST00000394986 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
SNCA-203ENST00000394986 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
SNCA-203ENST00000394986 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
SNCA-203ENST00000394986 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
SNCA-203ENST00000394986 KRTAP20-2Q3LI61 65 aa6.11□□□□□ -1.43
SNCA-203ENST00000394986 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
SNCA-203ENST00000394986 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SNCA-203ENST00000394986 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
SNCA-203ENST00000394986 GPR98Q8WXG9 6306 aa6.06□□□□□ -1.44
SNCA-203ENST00000394986 MT1AP04731 61 aa6.05□□□□□ -1.44
SNCA-203ENST00000394986 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
SNCA-203ENST00000394986 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
SNCA-203ENST00000394986 KRTAP5-10Q6L8G5 202 aa5.82□□□□□ -1.48
SNCA-203ENST00000394986 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
SNCA-203ENST00000394986 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
SNCA-203ENST00000394986 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
SNCA-203ENST00000394986 KRTAP5-7Q6L8G8 165 aa5.55□□□□□ -1.52
SNCA-203ENST00000394986 MT3P25713 68 aa5.5□□□□□ -1.53
SNCA-203ENST00000394986 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
SNCA-203ENST00000394986 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
SNCA-203ENST00000394986 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
SNCA-203ENST00000394986 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
SNCA-203ENST00000394986 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
SNCA-203ENST00000394986 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
SNCA-203ENST00000394986 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
SNCA-203ENST00000394986 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
SNCA-203ENST00000394986 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SNCA-203ENST00000394986 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
SNCA-203ENST00000394986 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
SNCA-203ENST00000394986 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
SNCA-203ENST00000394986 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
SNCA-203ENST00000394986 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
SNCA-203ENST00000394986 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
SNCA-203ENST00000394986 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
SNCA-203ENST00000394986 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
SNCA-203ENST00000394986 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SNCA-203ENST00000394986 INE1O15225 51 aa3.74□□□□□ -1.81
SNCA-203ENST00000394986 PRM1P04553 51 aa3.63□□□□□ -1.83
SNCA-203ENST00000394986 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
SNCA-203ENST00000394986 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
SNCA-203ENST00000394986 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SNCA-203ENST00000394986 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 135.9 ms