RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 LUZP6Q538Z0 58 aa5.09□□□□□ -1.59
SSH2-203ENST00000394848 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
SSH2-203ENST00000394848 LCE3AQ5TA76 89 aa4.96□□□□□ -1.61
SSH2-203ENST00000394848 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
SSH2-203ENST00000394848 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
SSH2-203ENST00000394848 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
SSH2-203ENST00000394848 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
SSH2-203ENST00000394848 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
SSH2-203ENST00000394848 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
SSH2-203ENST00000394848 KMT2DO14686 5537 aa4.75□□□□□ -1.65
SSH2-203ENST00000394848 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
SSH2-203ENST00000394848 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
SSH2-203ENST00000394848 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
SSH2-203ENST00000394848 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.68□□□□□ -1.66
SSH2-203ENST00000394848 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
SSH2-203ENST00000394848 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
SSH2-203ENST00000394848 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
SSH2-203ENST00000394848 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
SSH2-203ENST00000394848 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
SSH2-203ENST00000394848 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
SSH2-203ENST00000394848 MT1EP04732 61 aa4.53□□□□□ -1.69
SSH2-203ENST00000394848 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
SSH2-203ENST00000394848 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SSH2-203ENST00000394848 MT1LQ93083 61 aa4.45□□□□□ -1.7
SSH2-203ENST00000394848 NEBP20929 6669 aa4.43□□□□□ -1.7
SSH2-203ENST00000394848 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
SSH2-203ENST00000394848 SPRR2EP22531 72 aa4.41□□□□□ -1.7
SSH2-203ENST00000394848 SPRR2BP35325 72 aa4.41□□□□□ -1.7
SSH2-203ENST00000394848 SPRR2AP35326 72 aa4.41□□□□□ -1.7
SSH2-203ENST00000394848 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
SSH2-203ENST00000394848 MT1GP13640 62 aa4.32□□□□□ -1.72
SSH2-203ENST00000394848 SPRR2DP22532 72 aa4.26□□□□□ -1.73
SSH2-203ENST00000394848 MT1MQ8N339 61 aa4.26□□□□□ -1.73
SSH2-203ENST00000394848 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SSH2-203ENST00000394848 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
SSH2-203ENST00000394848 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
SSH2-203ENST00000394848 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
SSH2-203ENST00000394848 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
SSH2-203ENST00000394848 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.74
SSH2-203ENST00000394848 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
SSH2-203ENST00000394848 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SSH2-203ENST00000394848 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
SSH2-203ENST00000394848 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
SSH2-203ENST00000394848 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
SSH2-203ENST00000394848 INE1O15225 51 aa3.93□□□□□ -1.78
SSH2-203ENST00000394848 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
SSH2-203ENST00000394848 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
SSH2-203ENST00000394848 MT1AP04731 61 aa3.77□□□□□ -1.81
SSH2-203ENST00000394848 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SSH2-203ENST00000394848 MT4P47944 62 aa3.69□□□□□ -1.82
SSH2-203ENST00000394848 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
SSH2-203ENST00000394848 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SSH2-203ENST00000394848 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
SSH2-203ENST00000394848 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SSH2-203ENST00000394848 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
SSH2-203ENST00000394848 MT3P25713 68 aa3.55□□□□□ -1.84
SSH2-203ENST00000394848 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
SSH2-203ENST00000394848 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
SSH2-203ENST00000394848 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SSH2-203ENST00000394848 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SSH2-203ENST00000394848 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
SSH2-203ENST00000394848 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
SSH2-203ENST00000394848 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
SSH2-203ENST00000394848 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
SSH2-203ENST00000394848 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
SSH2-203ENST00000394848 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
SSH2-203ENST00000394848 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
SSH2-203ENST00000394848 PRM1P04553 51 aa2.91□□□□□ -1.94
SSH2-203ENST00000394848 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SSH2-203ENST00000394848 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SSH2-203ENST00000394848 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SSH2-203ENST00000394848 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SSH2-203ENST00000394848 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
SSH2-203ENST00000394848 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
SSH2-203ENST00000394848 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
SSH2-203ENST00000394848 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SSH2-203ENST00000394848 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
SSH2-203ENST00000394848 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 204.5 ms