RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 MUC12Q9UKN1 5478 aa8.54□□□□□ -1.04
RARA-203ENST00000394086 SPRR2FQ96RM1 72 aa8.52□□□□□ -1.05
RARA-203ENST00000394086 LCE3CQ5T5A8 94 aa8.51□□□□□ -1.05
RARA-203ENST00000394086 NEBP20929 6669 aa8.46□□□□□ -1.05
RARA-203ENST00000394086 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
RARA-203ENST00000394086 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
RARA-203ENST00000394086 MDN1Q9NU22 5596 aa8.38□□□□□ -1.07
RARA-203ENST00000394086 SPRR2EP22531 72 aa8.29□□□□□ -1.08
RARA-203ENST00000394086 SPRR2BP35325 72 aa8.29□□□□□ -1.08
RARA-203ENST00000394086 SPRR2AP35326 72 aa8.29□□□□□ -1.08
RARA-203ENST00000394086 LCE1AQ5T7P2 110 aa8.22□□□□□ -1.09
RARA-203ENST00000394086 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.1
RARA-203ENST00000394086 KRTAP2-3P0C7H8 128 aa8.1□□□□□ -1.11
RARA-203ENST00000394086 KRTAP2-4Q9BYR9 128 aa8.1□□□□□ -1.11
RARA-203ENST00000394086 KRTAP2-1Q9BYU5 128 aa8.1□□□□□ -1.11
RARA-203ENST00000394086 MT1EP04732 61 aa8.06□□□□□ -1.12
RARA-203ENST00000394086 KRTAP9-6A8MVA2 160 aa8.05□□□□□ -1.12
RARA-203ENST00000394086 KRTAP20-1Q3LI63 56 aa8.02□□□□□ -1.13
RARA-203ENST00000394086 SPRR2DP22532 72 aa8□□□□□ -1.13
RARA-203ENST00000394086 KRTAP19-3Q7Z4W3 81 aa7.91□□□□□ -1.14
RARA-203ENST00000394086 LCE5AQ5TCM9 118 aa7.86□□□□□ -1.15
RARA-203ENST00000394086 MT1LQ93083 61 aa7.86□□□□□ -1.15
RARA-203ENST00000394086 MT1GP13640 62 aa7.77□□□□□ -1.17
RARA-203ENST00000394086 LCE3BQ5TA77 95 aa7.74□□□□□ -1.17
RARA-203ENST00000394086 KRTAP4-7Q9BYR0 210 aa7.73□□□□□ -1.17
RARA-203ENST00000394086 KRTAP2-2Q9BYT5 123 aa7.69□□□□□ -1.18
RARA-203ENST00000394086 MT1MQ8N339 61 aa7.64□□□□□ -1.19
RARA-203ENST00000394086 DSTQ03001 7570 aaKnown RBP7.64□□□□□ -1.19
RARA-203ENST00000394086 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
RARA-203ENST00000394086 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
RARA-203ENST00000394086 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
RARA-203ENST00000394086 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
RARA-203ENST00000394086 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
RARA-203ENST00000394086 KRTAP5-4Q6L8H1 288 aa7.01□□□□□ -1.29
RARA-203ENST00000394086 MT4P47944 62 aa6.99□□□□□ -1.29
RARA-203ENST00000394086 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
RARA-203ENST00000394086 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
RARA-203ENST00000394086 MT1AP04731 61 aa6.93□□□□□ -1.3
RARA-203ENST00000394086 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.31
RARA-203ENST00000394086 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
RARA-203ENST00000394086 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
RARA-203ENST00000394086 KRTAP20-2Q3LI61 65 aa6.6□□□□□ -1.35
RARA-203ENST00000394086 LCE3DQ9BYE3 92 aa6.6□□□□□ -1.35
RARA-203ENST00000394086 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.36
RARA-203ENST00000394086 LCE3EQ5T5B0 92 aa6.58□□□□□ -1.36
RARA-203ENST00000394086 GPR98Q8WXG9 6306 aa6.5□□□□□ -1.37
RARA-203ENST00000394086 AHNAK2Q8IVF2 5795 aa6.44□□□□□ -1.38
RARA-203ENST00000394086 KRTAP5-3Q6L8H2 238 aa6.38□□□□□ -1.39
RARA-203ENST00000394086 PRM1P04553 51 aa6.37□□□□□ -1.39
RARA-203ENST00000394086 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
RARA-203ENST00000394086 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
RARA-203ENST00000394086 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
RARA-203ENST00000394086 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
RARA-203ENST00000394086 MT3P25713 68 aa6.04□□□□□ -1.44
RARA-203ENST00000394086 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
RARA-203ENST00000394086 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
RARA-203ENST00000394086 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
RARA-203ENST00000394086 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
RARA-203ENST00000394086 KRTAP5-1Q6L8H4 278 aa5.51□□□□□ -1.53
RARA-203ENST00000394086 LCE1EQ5T753 118 aa5.41□□□□□ -1.54
RARA-203ENST00000394086 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
RARA-203ENST00000394086 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
RARA-203ENST00000394086 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
RARA-203ENST00000394086 AHNAKQ09666 5890 aaKnown RBP5.18□□□□□ -1.58
RARA-203ENST00000394086 LCE1BQ5T7P3 118 aa5.13□□□□□ -1.59
RARA-203ENST00000394086 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
RARA-203ENST00000394086 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
RARA-203ENST00000394086 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
RARA-203ENST00000394086 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
RARA-203ENST00000394086 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
RARA-203ENST00000394086 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
RARA-203ENST00000394086 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
RARA-203ENST00000394086 KRTAP21-1Q3LI58 79 aa4.21□□□□□ -1.74
RARA-203ENST00000394086 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
RARA-203ENST00000394086 PHGR1C9JFL3 82 aa3.9□□□□□ -1.79
RARA-203ENST00000394086 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
RARA-203ENST00000394086 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 6.9 ms