RNA–Protein interactions for RNA: ENST00000393605.7

ARAP1-203, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARAP1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-203ENST00000393605 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
ARAP1-203ENST00000393605 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
ARAP1-203ENST00000393605 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
ARAP1-203ENST00000393605 MT1EP04732 61 aa4.93□□□□□ -1.62
ARAP1-203ENST00000393605 MT1LQ93083 61 aa4.92□□□□□ -1.62
ARAP1-203ENST00000393605 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
ARAP1-203ENST00000393605 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.64
ARAP1-203ENST00000393605 SYNE2Q8WXH0 6885 aaKnown RBP4.82□□□□□ -1.64
ARAP1-203ENST00000393605 USH2AO75445 5202 aa4.81□□□□□ -1.64
ARAP1-203ENST00000393605 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
ARAP1-203ENST00000393605 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
ARAP1-203ENST00000393605 MT1MQ8N339 61 aa4.76□□□□□ -1.65
ARAP1-203ENST00000393605 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
ARAP1-203ENST00000393605 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
ARAP1-203ENST00000393605 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
ARAP1-203ENST00000393605 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
ARAP1-203ENST00000393605 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
ARAP1-203ENST00000393605 MT4P47944 62 aa4.64□□□□□ -1.67
ARAP1-203ENST00000393605 KMT2DO14686 5537 aa4.58□□□□□ -1.68
ARAP1-203ENST00000393605 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
ARAP1-203ENST00000393605 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
ARAP1-203ENST00000393605 MACF1Q9UPN3 7388 aaKnown RBP4.44□□□□□ -1.7
ARAP1-203ENST00000393605 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
ARAP1-203ENST00000393605 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
ARAP1-203ENST00000393605 PRM1P04553 51 aa4.39□□□□□ -1.71
ARAP1-203ENST00000393605 MT3P25713 68 aa4.39□□□□□ -1.71
ARAP1-203ENST00000393605 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
ARAP1-203ENST00000393605 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
ARAP1-203ENST00000393605 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
ARAP1-203ENST00000393605 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
ARAP1-203ENST00000393605 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
ARAP1-203ENST00000393605 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
ARAP1-203ENST00000393605 MT1AP04731 61 aa4.29□□□□□ -1.72
ARAP1-203ENST00000393605 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
ARAP1-203ENST00000393605 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
ARAP1-203ENST00000393605 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
ARAP1-203ENST00000393605 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
ARAP1-203ENST00000393605 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
ARAP1-203ENST00000393605 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
ARAP1-203ENST00000393605 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
ARAP1-203ENST00000393605 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
ARAP1-203ENST00000393605 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
ARAP1-203ENST00000393605 NEBP20929 6669 aa4.02□□□□□ -1.77
ARAP1-203ENST00000393605 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
ARAP1-203ENST00000393605 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
ARAP1-203ENST00000393605 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
ARAP1-203ENST00000393605 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
ARAP1-203ENST00000393605 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
ARAP1-203ENST00000393605 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
ARAP1-203ENST00000393605 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
ARAP1-203ENST00000393605 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
ARAP1-203ENST00000393605 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ARAP1-203ENST00000393605 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
ARAP1-203ENST00000393605 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
ARAP1-203ENST00000393605 MUC5ACP98088 5654 aa3.34□□□□□ -1.88
ARAP1-203ENST00000393605 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
ARAP1-203ENST00000393605 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
ARAP1-203ENST00000393605 KRTAP5-4Q6L8H1 288 aa3.25□□□□□ -1.89
ARAP1-203ENST00000393605 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
ARAP1-203ENST00000393605 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
ARAP1-203ENST00000393605 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
ARAP1-203ENST00000393605 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
ARAP1-203ENST00000393605 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
ARAP1-203ENST00000393605 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
ARAP1-203ENST00000393605 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
ARAP1-203ENST00000393605 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
ARAP1-203ENST00000393605 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -1.99
ARAP1-203ENST00000393605 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
ARAP1-203ENST00000393605 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
ARAP1-203ENST00000393605 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
ARAP1-203ENST00000393605 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ARAP1-203ENST00000393605 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
ARAP1-203ENST00000393605 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
ARAP1-203ENST00000393605 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
ARAP1-203ENST00000393605 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
ARAP1-203ENST00000393605 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
ARAP1-203ENST00000393605 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms