RNA–Protein interactions for RNA: ENST00000393605.7

ARAP1-203, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARAP1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-203ENST00000393605 DDX3XO00571 662 aaKnown RBP eCLIP15.29■□□□□ 0.041e-33■■■■□ 21.7
ARAP1-203ENST00000393605 GRSF1Q12849 480 aaKnown RBP eCLIP14.64□□□□□ -0.071e-18■■■□□ 18.5
ARAP1-203ENST00000393605 AARSP49588 968 aaKnown RBP eCLIP15.17■□□□□ 0.022e-17■■■■■ 92.7
ARAP1-203ENST00000393605 TROVE2P10155 538 aaKnown RBP eCLIP15.77■□□□□ 0.121e-14■□□□□ 9.3
ARAP1-203ENST00000393605 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.943e-14■■■■□ 23.5
ARAP1-203ENST00000393605 ILF3Q12906 894 aaKnown RBP eCLIP14.58□□□□□ -0.077e-11■■□□□ 13
ARAP1-203ENST00000393605 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.73□□□□□ -0.051e-10■■■■■ 36.2
ARAP1-203ENST00000393605 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.761e-9■■■□□ 17.8
ARAP1-203ENST00000393605 UPF1Q92900 1129 aaKnown RBP eCLIP15.49■□□□□ 0.072e-9■■■■■ 40.8
ARAP1-203ENST00000393605 TARDBPQ13148 414 aaKnown RBP eCLIP14.14□□□□□ -0.152e-9■■■■■ 47.5
ARAP1-203ENST00000393605 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.02□□□□□ -0.172e-9■■■■■ 33.1
ARAP1-203ENST00000393605 HNRNPLP14866 589 aaKnown RBP eCLIP14.74□□□□□ -0.055e-9■■■■□ 22
ARAP1-203ENST00000393605 AKAP1Q92667 903 aaKnown RBP eCLIP13.78□□□□□ -0.27e-9■■■□□ 16.3
ARAP1-203ENST00000393605 DDX42Q86XP3 938 aaKnown RBP eCLIP15.39■□□□□ 0.059e-9■■□□□ 12.4
ARAP1-203ENST00000393605 SF3A3Q12874 501 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■■■■□ 20.9
ARAP1-203ENST00000393605 RBM22Q9NW64 420 aaKnown RBP eCLIP15.19■□□□□ 0.022e-8■■■■■ 35.4
ARAP1-203ENST00000393605 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14□□□□□ -0.173e-8■■■■■ 28.3
ARAP1-203ENST00000393605 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.49■□□□□ 0.073e-8■■□□□ 13.5
ARAP1-203ENST00000393605 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.35e-8■□□□□ 10.8
ARAP1-203ENST00000393605 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.075e-8■■■□□ 14.9
ARAP1-203ENST00000393605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.026e-8■■■■■ 31.6
ARAP1-203ENST00000393605 SLBPQ14493 270 aaKnown RBP eCLIP14.4□□□□□ -0.16e-8■□□□□ 8.7
ARAP1-203ENST00000393605 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.517e-8■■■□□ 15.7
ARAP1-203ENST00000393605 PPIGQ13427 754 aaKnown RBP eCLIP14.96□□□□□ -0.018e-8■■■□□ 16.9
ARAP1-203ENST00000393605 PCBP1Q15365 356 aaKnown RBP eCLIP15.11■□□□□ 0.019e-8■■■■□ 20.8
ARAP1-203ENST00000393605 TRA2AQ13595 282 aaKnown RBP eCLIP13.38□□□□□ -0.271e-7■□□□□ 8.2
ARAP1-203ENST00000393605 EIF3DO15371 548 aaKnown RBP eCLIP15.59■□□□□ 0.091e-7■□□□□ 8.6
ARAP1-203ENST00000393605 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.792e-7■■■■■ 33.9
ARAP1-203ENST00000393605 GTF2F1P35269 517 aaKnown RBP eCLIP16.61■□□□□ 0.252e-7■■■■■ 37.9
ARAP1-203ENST00000393605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.87□□□□□ -0.352e-7■■■■□ 19.6
ARAP1-203ENST00000393605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■□□ 15.7
ARAP1-203ENST00000393605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.913e-7■■□□□ 14.4
ARAP1-203ENST00000393605 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.494e-7■■□□□ 12.7
ARAP1-203ENST00000393605 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.414e-7■■■■■ 28.4
ARAP1-203ENST00000393605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.325e-7■□□□□ 11.2
ARAP1-203ENST00000393605 EFTUD2Q15029 972 aaKnown RBP eCLIP15.19■□□□□ 0.025e-7■■■■□ 23.4
ARAP1-203ENST00000393605 GPKOWQ92917 476 aaPredicted RBP eCLIP16.6■□□□□ 0.255e-7■□□□□ 9.3
ARAP1-203ENST00000393605 AQRO60306 1485 aaKnown RBP eCLIP19.76■□□□□ 0.756e-7■■■■■ 31.7
ARAP1-203ENST00000393605 PRPF4O43172 522 aaKnown RBP eCLIP15.09■□□□□ 0.016e-7■■□□□ 14
ARAP1-203ENST00000393605 DDX6P26196 483 aaKnown RBP eCLIP14.53□□□□□ -0.087e-7■□□□□ 9.2
ARAP1-203ENST00000393605 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.17□□□□□ -0.147e-7■■■■□ 25.4
ARAP1-203ENST00000393605 NKRFO15226 690 aaKnown RBP eCLIP15.47■□□□□ 0.078e-7■□□□□ 9.8
ARAP1-203ENST00000393605 RBFOX2O43251 390 aaKnown RBP eCLIP12.18□□□□□ -0.468e-7■■■■□ 20.5
ARAP1-203ENST00000393605 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.399e-7■■■□□ 15.5
ARAP1-203ENST00000393605 DKC1O60832 514 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■■□ 23.2
ARAP1-203ENST00000393605 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■□□□□ 10
ARAP1-203ENST00000393605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■■■■■ 28.6
ARAP1-203ENST00000393605 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.291e-6■■□□□ 12
ARAP1-203ENST00000393605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.46■□□□□ 0.221e-6■■■□□ 15.3
ARAP1-203ENST00000393605 HNRNPKP61978 463 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■□ 22.7
ARAP1-203ENST00000393605 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.37■□□□□ 0.051e-6■■■■□ 26.1
ARAP1-203ENST00000393605 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■■■□ 19.5
ARAP1-203ENST00000393605 FMR1Q06787 632 aaKnown RBP eCLIP15.81■□□□□ 0.121e-6■■□□□ 11.4
ARAP1-203ENST00000393605 MATR3P43243 847 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■□ 23.9
ARAP1-203ENST00000393605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■■■■ 103.7
ARAP1-203ENST00000393605 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■□□ 16
ARAP1-203ENST00000393605 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.252e-6■■■■□ 26.5
ARAP1-203ENST00000393605 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.862e-6■■■■□ 19.3
ARAP1-203ENST00000393605 PCBP2Q15366 365 aaKnown RBP eCLIP14.33□□□□□ -0.112e-6■■■□□ 17.1
ARAP1-203ENST00000393605 SF3B1O75533 1304 aaKnown RBP eCLIP15.16■□□□□ 0.022e-6■■■■■ 213.6
ARAP1-203ENST00000393605 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■□□□□ 8.7
ARAP1-203ENST00000393605 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■□□□ 13.2
ARAP1-203ENST00000393605 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.293e-6■□□□□ 10.5
ARAP1-203ENST00000393605 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.313e-6■■■■■ 31.9
ARAP1-203ENST00000393605 EIF3HO15372 352 aaKnown RBP eCLIP15.18■□□□□ 0.023e-6■■□□□ 12.3
ARAP1-203ENST00000393605 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.183e-6■■■■■ 26.9
ARAP1-203ENST00000393605 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.44□□□□□ -0.13e-6■■■■■ 122.8
ARAP1-203ENST00000393605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.02■□□□□ 0.163e-6■■□□□ 11.4
ARAP1-203ENST00000393605 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■■■□□ 15.8
ARAP1-203ENST00000393605 SRSF7Q16629 238 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■□□□□ 8.6
ARAP1-203ENST00000393605 RPS3P23396 243 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■■■□ 20.1
ARAP1-203ENST00000393605 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■□□□□ 10.6
ARAP1-203ENST00000393605 ZC3H11AO75152 810 aaKnown RBP eCLIP15.52■□□□□ 0.086e-6■■■□□ 16.5
ARAP1-203ENST00000393605 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.346e-6■■■■□ 21.9
ARAP1-203ENST00000393605 AGGF1Q8N302 714 aaeCLIP15.1■□□□□ 0.016e-6■□□□□ 8.9
ARAP1-203ENST00000393605 SMNDC1O75940 238 aaKnown RBP eCLIP14.81□□□□□ -0.047e-6■■□□□ 14.3
Retrieved 76 of 76 RNA–protein pairs in 15.7 ms