RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
ME3-202ENST00000393324 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
ME3-202ENST00000393324 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
ME3-202ENST00000393324 KRTAP19-3Q7Z4W3 81 aa6.93□□□□□ -1.3
ME3-202ENST00000393324 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
ME3-202ENST00000393324 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
ME3-202ENST00000393324 MT1GP13640 62 aa6.88□□□□□ -1.31
ME3-202ENST00000393324 MT1MQ8N339 61 aa6.83□□□□□ -1.32
ME3-202ENST00000393324 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
ME3-202ENST00000393324 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
ME3-202ENST00000393324 KRTAP5-9P26371 169 aa6.76□□□□□ -1.33
ME3-202ENST00000393324 MDN1Q9NU22 5596 aa6.71□□□□□ -1.34
ME3-202ENST00000393324 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
ME3-202ENST00000393324 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
ME3-202ENST00000393324 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
ME3-202ENST00000393324 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
ME3-202ENST00000393324 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
ME3-202ENST00000393324 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
ME3-202ENST00000393324 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
ME3-202ENST00000393324 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
ME3-202ENST00000393324 SPRR2EP22531 72 aa6.54□□□□□ -1.36
ME3-202ENST00000393324 SPRR2BP35325 72 aa6.54□□□□□ -1.36
ME3-202ENST00000393324 SPRR2AP35326 72 aa6.54□□□□□ -1.36
ME3-202ENST00000393324 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
ME3-202ENST00000393324 SPRR2DP22532 72 aa6.29□□□□□ -1.4
ME3-202ENST00000393324 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
ME3-202ENST00000393324 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
ME3-202ENST00000393324 NEBP20929 6669 aa6.09□□□□□ -1.43
ME3-202ENST00000393324 MT1AP04731 61 aa6.06□□□□□ -1.44
ME3-202ENST00000393324 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
ME3-202ENST00000393324 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
ME3-202ENST00000393324 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
ME3-202ENST00000393324 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
ME3-202ENST00000393324 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
ME3-202ENST00000393324 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
ME3-202ENST00000393324 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
ME3-202ENST00000393324 KRTAP2-2Q9BYT5 123 aa5.55□□□□□ -1.52
ME3-202ENST00000393324 KRTAP6-2Q3LI66 62 aa5.54□□□□□ -1.52
ME3-202ENST00000393324 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
ME3-202ENST00000393324 MT3P25713 68 aa5.49□□□□□ -1.53
ME3-202ENST00000393324 MT4P47944 62 aa5.49□□□□□ -1.53
ME3-202ENST00000393324 LCE3DQ9BYE3 92 aa5.48□□□□□ -1.53
ME3-202ENST00000393324 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
ME3-202ENST00000393324 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
ME3-202ENST00000393324 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
ME3-202ENST00000393324 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
ME3-202ENST00000393324 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
ME3-202ENST00000393324 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
ME3-202ENST00000393324 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
ME3-202ENST00000393324 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
ME3-202ENST00000393324 PRM1P04553 51 aa5.18□□□□□ -1.58
ME3-202ENST00000393324 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
ME3-202ENST00000393324 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
ME3-202ENST00000393324 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
ME3-202ENST00000393324 AHNAK2Q8IVF2 5795 aa4.56□□□□□ -1.68
ME3-202ENST00000393324 MUC5ACP98088 5654 aa4.53□□□□□ -1.69
ME3-202ENST00000393324 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
ME3-202ENST00000393324 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
ME3-202ENST00000393324 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
ME3-202ENST00000393324 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
ME3-202ENST00000393324 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
ME3-202ENST00000393324 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
ME3-202ENST00000393324 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
ME3-202ENST00000393324 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
ME3-202ENST00000393324 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
ME3-202ENST00000393324 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
ME3-202ENST00000393324 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
ME3-202ENST00000393324 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
ME3-202ENST00000393324 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
ME3-202ENST00000393324 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
ME3-202ENST00000393324 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
ME3-202ENST00000393324 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
ME3-202ENST00000393324 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
ME3-202ENST00000393324 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
ME3-202ENST00000393324 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
ME3-202ENST00000393324 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
ME3-202ENST00000393324 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms