RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
CTSC-202ENST00000393301 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
CTSC-202ENST00000393301 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
CTSC-202ENST00000393301 PSPHP1O15172 72 aa4.68□□□□□ -1.66
CTSC-202ENST00000393301 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
CTSC-202ENST00000393301 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
CTSC-202ENST00000393301 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
CTSC-202ENST00000393301 MT1EP04732 61 aa4.63□□□□□ -1.67
CTSC-202ENST00000393301 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
CTSC-202ENST00000393301 K7ERS5 55 aa4.61□□□□□ -1.67
CTSC-202ENST00000393301 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
CTSC-202ENST00000393301 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
CTSC-202ENST00000393301 A6NED7 52 aa4.58□□□□□ -1.68
CTSC-202ENST00000393301 TNP1P09430 55 aa4.58□□□□□ -1.68
CTSC-202ENST00000393301 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
CTSC-202ENST00000393301 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CTSC-202ENST00000393301 MT1GP13640 62 aa4.5□□□□□ -1.69
CTSC-202ENST00000393301 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
CTSC-202ENST00000393301 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
CTSC-202ENST00000393301 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
CTSC-202ENST00000393301 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
CTSC-202ENST00000393301 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
CTSC-202ENST00000393301 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
CTSC-202ENST00000393301 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
CTSC-202ENST00000393301 MT1MQ8N339 61 aa4.41□□□□□ -1.7
CTSC-202ENST00000393301 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
CTSC-202ENST00000393301 MT1LQ93083 61 aa4.39□□□□□ -1.71
CTSC-202ENST00000393301 KRTAP5-4Q6L8H1 288 aa4.38□□□□□ -1.71
CTSC-202ENST00000393301 ROMO1P60602 79 aa4.34□□□□□ -1.71
CTSC-202ENST00000393301 MT4P47944 62 aa4.31□□□□□ -1.72
CTSC-202ENST00000393301 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
CTSC-202ENST00000393301 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
CTSC-202ENST00000393301 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
CTSC-202ENST00000393301 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
CTSC-202ENST00000393301 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
CTSC-202ENST00000393301 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
CTSC-202ENST00000393301 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
CTSC-202ENST00000393301 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
CTSC-202ENST00000393301 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
CTSC-202ENST00000393301 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
CTSC-202ENST00000393301 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
CTSC-202ENST00000393301 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
CTSC-202ENST00000393301 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
CTSC-202ENST00000393301 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
CTSC-202ENST00000393301 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
CTSC-202ENST00000393301 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
CTSC-202ENST00000393301 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CTSC-202ENST00000393301 MT1AP04731 61 aa3.75□□□□□ -1.81
CTSC-202ENST00000393301 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CTSC-202ENST00000393301 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
CTSC-202ENST00000393301 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
CTSC-202ENST00000393301 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
CTSC-202ENST00000393301 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
CTSC-202ENST00000393301 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CTSC-202ENST00000393301 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
CTSC-202ENST00000393301 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
CTSC-202ENST00000393301 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
CTSC-202ENST00000393301 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
CTSC-202ENST00000393301 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
CTSC-202ENST00000393301 MT3P25713 68 aa3.42□□□□□ -1.86
CTSC-202ENST00000393301 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CTSC-202ENST00000393301 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CTSC-202ENST00000393301 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
CTSC-202ENST00000393301 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
CTSC-202ENST00000393301 LCE1CQ5T751 118 aa3□□□□□ -1.93
CTSC-202ENST00000393301 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CTSC-202ENST00000393301 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CTSC-202ENST00000393301 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CTSC-202ENST00000393301 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
CTSC-202ENST00000393301 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
CTSC-202ENST00000393301 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CTSC-202ENST00000393301 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CTSC-202ENST00000393301 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CTSC-202ENST00000393301 INE1O15225 51 aa2.37□□□□□ -2.03
CTSC-202ENST00000393301 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
CTSC-202ENST00000393301 PRM1P04553 51 aa2.16□□□□□ -2.06
CTSC-202ENST00000393301 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CTSC-202ENST00000393301 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 57.1 ms