RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 KRTAP4-9Q9BYQ8 210 aa1.41□□□□□ -2.18
XRN1-202ENST00000392981 USH2AO75445 5202 aa1.41□□□□□ -2.18
XRN1-202ENST00000392981 KRTAP4-7Q9BYR0 210 aa1.37□□□□□ -2.19
XRN1-202ENST00000392981 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
XRN1-202ENST00000392981 KRTAP12-4P60329 112 aa1.33□□□□□ -2.2
XRN1-202ENST00000392981 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
XRN1-202ENST00000392981 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
XRN1-202ENST00000392981 KRTAP19-2Q3LHN2 52 aa1.3□□□□□ -2.2
XRN1-202ENST00000392981 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
XRN1-202ENST00000392981 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
XRN1-202ENST00000392981 KMT2DO14686 5537 aa1.27□□□□□ -2.21
XRN1-202ENST00000392981 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
XRN1-202ENST00000392981 KRTAP21-3Q3LHN1 58 aa1.23□□□□□ -2.21
XRN1-202ENST00000392981 LCE3AQ5TA76 89 aa1.23□□□□□ -2.21
XRN1-202ENST00000392981 KRTAP5-8O75690 187 aa1.17□□□□□ -2.22
XRN1-202ENST00000392981 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
XRN1-202ENST00000392981 KRTAP9-6A8MVA2 160 aa1.16□□□□□ -2.22
XRN1-202ENST00000392981 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
XRN1-202ENST00000392981 MDN1Q9NU22 5596 aa1.15□□□□□ -2.22
XRN1-202ENST00000392981 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.23
XRN1-202ENST00000392981 GPR98Q8WXG9 6306 aa1.13□□□□□ -2.23
XRN1-202ENST00000392981 KRTAP4-4Q9BYR3 166 aa1.07□□□□□ -2.24
XRN1-202ENST00000392981 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP2-3P0C7H8 128 aa1.06□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP2-4Q9BYR9 128 aa1.06□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP2-1Q9BYU5 128 aa1.06□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP5-5Q701N2 237 aaPredicted RBP1.05□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
XRN1-202ENST00000392981 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
XRN1-202ENST00000392981 OBSCNQ5VST9 7968 aa1.04□□□□□ -2.24
XRN1-202ENST00000392981 KRTAP19-5Q3LI72 72 aa1.04□□□□□ -2.24
XRN1-202ENST00000392981 SPRR2FQ96RM1 72 aa1.03□□□□□ -2.24
XRN1-202ENST00000392981 MT1HL1P0DM35 61 aa1.02□□□□□ -2.25
XRN1-202ENST00000392981 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
XRN1-202ENST00000392981 PRM1P04553 51 aa0.98□□□□□ -2.25
XRN1-202ENST00000392981 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
XRN1-202ENST00000392981 DSTQ03001 7570 aaKnown RBP0.97□□□□□ -2.25
XRN1-202ENST00000392981 MT1GP13640 62 aa0.96□□□□□ -2.26
XRN1-202ENST00000392981 SYNE2Q8WXH0 6885 aaKnown RBP0.95□□□□□ -2.26
XRN1-202ENST00000392981 SPRR2EP22531 72 aa0.94□□□□□ -2.26
XRN1-202ENST00000392981 SPRR2BP35325 72 aa0.94□□□□□ -2.26
XRN1-202ENST00000392981 SPRR2AP35326 72 aa0.94□□□□□ -2.26
XRN1-202ENST00000392981 KRTAP20-1Q3LI63 56 aa0.94□□□□□ -2.26
XRN1-202ENST00000392981 KRTAP5-11Q6L8G4 156 aa0.94□□□□□ -2.26
XRN1-202ENST00000392981 MT2AP02795 61 aa0.92□□□□□ -2.26
XRN1-202ENST00000392981 LCE1CQ5T751 118 aa0.92□□□□□ -2.26
XRN1-202ENST00000392981 LCE1BQ5T7P3 118 aa0.92□□□□□ -2.26
XRN1-202ENST00000392981 SPRR2DP22532 72 aa0.92□□□□□ -2.26
XRN1-202ENST00000392981 MUC19Q7Z5P9 8384 aa0.9□□□□□ -2.26
XRN1-202ENST00000392981 MT1HP80294 61 aa0.89□□□□□ -2.27
XRN1-202ENST00000392981 MT1FP04733 61 aa0.88□□□□□ -2.27
XRN1-202ENST00000392981 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
XRN1-202ENST00000392981 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
XRN1-202ENST00000392981 MT1LQ93083 61 aa0.88□□□□□ -2.27
XRN1-202ENST00000392981 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
XRN1-202ENST00000392981 NEBP20929 6669 aa0.85□□□□□ -2.27
XRN1-202ENST00000392981 MT1AP04731 61 aa0.84□□□□□ -2.27
XRN1-202ENST00000392981 MT1XP80297 61 aa0.83□□□□□ -2.28
XRN1-202ENST00000392981 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
XRN1-202ENST00000392981 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
XRN1-202ENST00000392981 MT1BP07438 61 aa0.81□□□□□ -2.28
XRN1-202ENST00000392981 MT4P47944 62 aa0.81□□□□□ -2.28
XRN1-202ENST00000392981 MT1EP04732 61 aa0.8□□□□□ -2.28
XRN1-202ENST00000392981 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
XRN1-202ENST00000392981 MT1MQ8N339 61 aa0.77□□□□□ -2.29
XRN1-202ENST00000392981 KRTAP19-7Q3SYF9 63 aa0.75□□□□□ -2.29
XRN1-202ENST00000392981 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
XRN1-202ENST00000392981 KRTAP19-6Q3LI70 58 aa0.72□□□□□ -2.29
XRN1-202ENST00000392981 KRTAP4-3Q9BYR4 195 aa0.71□□□□□ -2.3
XRN1-202ENST00000392981 KRTAP6-1Q3LI64 71 aa0.66□□□□□ -2.3
XRN1-202ENST00000392981 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
XRN1-202ENST00000392981 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
XRN1-202ENST00000392981 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
XRN1-202ENST00000392981 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
XRN1-202ENST00000392981 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
XRN1-202ENST00000392981 KRTAP21-2Q3LI59 83 aa0.54□□□□□ -2.32
XRN1-202ENST00000392981 MUC16Q8WXI7 14507 aa0.41□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms