RNA–Protein interactions for RNA: ENST00000391921.8

CD55-206, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best) BASIC

Gene CD55, Length 2,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-206ENST00000391921 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
CD55-206ENST00000391921 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
CD55-206ENST00000391921 KRTAP19-4Q3LI73 84 aa6.27□□□□□ -1.41
CD55-206ENST00000391921 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
CD55-206ENST00000391921 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
CD55-206ENST00000391921 SPRR2FQ96RM1 72 aa6.19□□□□□ -1.42
CD55-206ENST00000391921 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
CD55-206ENST00000391921 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
CD55-206ENST00000391921 MT1MQ8N339 61 aa6.16□□□□□ -1.42
CD55-206ENST00000391921 MT1GP13640 62 aa6.14□□□□□ -1.43
CD55-206ENST00000391921 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
CD55-206ENST00000391921 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
CD55-206ENST00000391921 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
CD55-206ENST00000391921 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
CD55-206ENST00000391921 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
CD55-206ENST00000391921 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
CD55-206ENST00000391921 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
CD55-206ENST00000391921 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.47
CD55-206ENST00000391921 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
CD55-206ENST00000391921 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
CD55-206ENST00000391921 SPRR2EP22531 72 aa5.7□□□□□ -1.5
CD55-206ENST00000391921 SPRR2BP35325 72 aa5.7□□□□□ -1.5
CD55-206ENST00000391921 SPRR2AP35326 72 aa5.7□□□□□ -1.5
CD55-206ENST00000391921 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
CD55-206ENST00000391921 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
CD55-206ENST00000391921 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CD55-206ENST00000391921 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
CD55-206ENST00000391921 MT1AP04731 61 aa5.46□□□□□ -1.54
CD55-206ENST00000391921 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
CD55-206ENST00000391921 SPRR2DP22532 72 aa5.45□□□□□ -1.54
CD55-206ENST00000391921 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
CD55-206ENST00000391921 KRTAP6-3Q3LI67 103 aa5.43□□□□□ -1.54
CD55-206ENST00000391921 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
CD55-206ENST00000391921 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
CD55-206ENST00000391921 NEBP20929 6669 aa5.18□□□□□ -1.58
CD55-206ENST00000391921 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
CD55-206ENST00000391921 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
CD55-206ENST00000391921 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
CD55-206ENST00000391921 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
CD55-206ENST00000391921 LCE3EQ5T5B0 92 aa5.02□□□□□ -1.61
CD55-206ENST00000391921 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
CD55-206ENST00000391921 MT3P25713 68 aa4.92□□□□□ -1.62
CD55-206ENST00000391921 MT4P47944 62 aa4.85□□□□□ -1.63
CD55-206ENST00000391921 PRM1P04553 51 aa4.84□□□□□ -1.64
CD55-206ENST00000391921 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
CD55-206ENST00000391921 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
CD55-206ENST00000391921 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
CD55-206ENST00000391921 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
CD55-206ENST00000391921 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
CD55-206ENST00000391921 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
CD55-206ENST00000391921 KRTAP2-2Q9BYT5 123 aa4.61□□□□□ -1.67
CD55-206ENST00000391921 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
CD55-206ENST00000391921 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
CD55-206ENST00000391921 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
CD55-206ENST00000391921 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
CD55-206ENST00000391921 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
CD55-206ENST00000391921 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CD55-206ENST00000391921 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
CD55-206ENST00000391921 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
CD55-206ENST00000391921 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
CD55-206ENST00000391921 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
CD55-206ENST00000391921 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
CD55-206ENST00000391921 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
CD55-206ENST00000391921 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CD55-206ENST00000391921 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
CD55-206ENST00000391921 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
CD55-206ENST00000391921 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
CD55-206ENST00000391921 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
CD55-206ENST00000391921 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CD55-206ENST00000391921 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
CD55-206ENST00000391921 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
CD55-206ENST00000391921 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
CD55-206ENST00000391921 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CD55-206ENST00000391921 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
CD55-206ENST00000391921 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
CD55-206ENST00000391921 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
CD55-206ENST00000391921 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms