RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 MT1LQ93083 61 aa5.26□□□□□ -1.57
LRCH1-202ENST00000389797 MT1EP04732 61 aa5.23□□□□□ -1.57
LRCH1-202ENST00000389797 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
LRCH1-202ENST00000389797 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
LRCH1-202ENST00000389797 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
LRCH1-202ENST00000389797 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
LRCH1-202ENST00000389797 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
LRCH1-202ENST00000389797 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
LRCH1-202ENST00000389797 MT1GP13640 62 aa4.94□□□□□ -1.62
LRCH1-202ENST00000389797 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
LRCH1-202ENST00000389797 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.63
LRCH1-202ENST00000389797 MT1MQ8N339 61 aa4.89□□□□□ -1.63
LRCH1-202ENST00000389797 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
LRCH1-202ENST00000389797 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
LRCH1-202ENST00000389797 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
LRCH1-202ENST00000389797 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
LRCH1-202ENST00000389797 KRTAP5-9P26371 169 aa4.78□□□□□ -1.64
LRCH1-202ENST00000389797 LCE1AQ5T7P2 110 aa4.78□□□□□ -1.64
LRCH1-202ENST00000389797 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
LRCH1-202ENST00000389797 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
LRCH1-202ENST00000389797 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
LRCH1-202ENST00000389797 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
LRCH1-202ENST00000389797 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
LRCH1-202ENST00000389797 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.68
LRCH1-202ENST00000389797 SPRR2EP22531 72 aa4.56□□□□□ -1.68
LRCH1-202ENST00000389797 SPRR2BP35325 72 aa4.56□□□□□ -1.68
LRCH1-202ENST00000389797 SPRR2AP35326 72 aa4.56□□□□□ -1.68
LRCH1-202ENST00000389797 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
LRCH1-202ENST00000389797 MT1AP04731 61 aa4.53□□□□□ -1.68
LRCH1-202ENST00000389797 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
LRCH1-202ENST00000389797 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
LRCH1-202ENST00000389797 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.69
LRCH1-202ENST00000389797 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
LRCH1-202ENST00000389797 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
LRCH1-202ENST00000389797 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
LRCH1-202ENST00000389797 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
LRCH1-202ENST00000389797 SPRR2DP22532 72 aa4.38□□□□□ -1.71
LRCH1-202ENST00000389797 PRM1P04553 51 aa4.33□□□□□ -1.72
LRCH1-202ENST00000389797 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
LRCH1-202ENST00000389797 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
LRCH1-202ENST00000389797 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
LRCH1-202ENST00000389797 NEBP20929 6669 aa4.26□□□□□ -1.73
LRCH1-202ENST00000389797 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
LRCH1-202ENST00000389797 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
LRCH1-202ENST00000389797 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
LRCH1-202ENST00000389797 MT3P25713 68 aa3.99□□□□□ -1.77
LRCH1-202ENST00000389797 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
LRCH1-202ENST00000389797 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
LRCH1-202ENST00000389797 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
LRCH1-202ENST00000389797 MT4P47944 62 aa3.83□□□□□ -1.8
LRCH1-202ENST00000389797 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
LRCH1-202ENST00000389797 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
LRCH1-202ENST00000389797 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
LRCH1-202ENST00000389797 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
LRCH1-202ENST00000389797 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
LRCH1-202ENST00000389797 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
LRCH1-202ENST00000389797 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
LRCH1-202ENST00000389797 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
LRCH1-202ENST00000389797 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
LRCH1-202ENST00000389797 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
LRCH1-202ENST00000389797 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
LRCH1-202ENST00000389797 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
LRCH1-202ENST00000389797 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
LRCH1-202ENST00000389797 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
LRCH1-202ENST00000389797 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
LRCH1-202ENST00000389797 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
LRCH1-202ENST00000389797 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
LRCH1-202ENST00000389797 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
LRCH1-202ENST00000389797 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
LRCH1-202ENST00000389797 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
LRCH1-202ENST00000389797 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
LRCH1-202ENST00000389797 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
LRCH1-202ENST00000389797 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
LRCH1-202ENST00000389797 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
LRCH1-202ENST00000389797 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
LRCH1-202ENST00000389797 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
LRCH1-202ENST00000389797 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms