RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 MT1EP04732 61 aa4.44□□□□□ -1.7
PTPRN2-202ENST00000389416 MT1LQ93083 61 aa4.43□□□□□ -1.7
PTPRN2-202ENST00000389416 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
PTPRN2-202ENST00000389416 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
PTPRN2-202ENST00000389416 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
PTPRN2-202ENST00000389416 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
PTPRN2-202ENST00000389416 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
PTPRN2-202ENST00000389416 MT1MQ8N339 61 aa4.28□□□□□ -1.72
PTPRN2-202ENST00000389416 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
PTPRN2-202ENST00000389416 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
PTPRN2-202ENST00000389416 USH2AO75445 5202 aa4.24□□□□□ -1.73
PTPRN2-202ENST00000389416 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
PTPRN2-202ENST00000389416 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
PTPRN2-202ENST00000389416 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
PTPRN2-202ENST00000389416 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
PTPRN2-202ENST00000389416 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
PTPRN2-202ENST00000389416 MT4P47944 62 aa4.07□□□□□ -1.76
PTPRN2-202ENST00000389416 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
PTPRN2-202ENST00000389416 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
PTPRN2-202ENST00000389416 KMT2DO14686 5537 aa4.01□□□□□ -1.77
PTPRN2-202ENST00000389416 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
PTPRN2-202ENST00000389416 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
PTPRN2-202ENST00000389416 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
PTPRN2-202ENST00000389416 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
PTPRN2-202ENST00000389416 MT3P25713 68 aa3.92□□□□□ -1.78
PTPRN2-202ENST00000389416 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
PTPRN2-202ENST00000389416 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
PTPRN2-202ENST00000389416 MT1AP04731 61 aa3.87□□□□□ -1.79
PTPRN2-202ENST00000389416 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
PTPRN2-202ENST00000389416 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
PTPRN2-202ENST00000389416 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
PTPRN2-202ENST00000389416 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
PTPRN2-202ENST00000389416 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
PTPRN2-202ENST00000389416 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
PTPRN2-202ENST00000389416 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
PTPRN2-202ENST00000389416 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
PTPRN2-202ENST00000389416 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
PTPRN2-202ENST00000389416 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
PTPRN2-202ENST00000389416 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
PTPRN2-202ENST00000389416 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PTPRN2-202ENST00000389416 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
PTPRN2-202ENST00000389416 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
PTPRN2-202ENST00000389416 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
PTPRN2-202ENST00000389416 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
PTPRN2-202ENST00000389416 PRM1P04553 51 aa3.58□□□□□ -1.84
PTPRN2-202ENST00000389416 NEBP20929 6669 aa3.5□□□□□ -1.85
PTPRN2-202ENST00000389416 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
PTPRN2-202ENST00000389416 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PTPRN2-202ENST00000389416 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
PTPRN2-202ENST00000389416 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
PTPRN2-202ENST00000389416 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
PTPRN2-202ENST00000389416 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
PTPRN2-202ENST00000389416 LCE1CQ5T751 118 aa3□□□□□ -1.93
PTPRN2-202ENST00000389416 LCE1EQ5T753 118 aa3□□□□□ -1.93
PTPRN2-202ENST00000389416 LCE1FQ5T754 118 aa3□□□□□ -1.93
PTPRN2-202ENST00000389416 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
PTPRN2-202ENST00000389416 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
PTPRN2-202ENST00000389416 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
PTPRN2-202ENST00000389416 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.97
PTPRN2-202ENST00000389416 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
PTPRN2-202ENST00000389416 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
PTPRN2-202ENST00000389416 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
PTPRN2-202ENST00000389416 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
PTPRN2-202ENST00000389416 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
PTPRN2-202ENST00000389416 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
PTPRN2-202ENST00000389416 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
PTPRN2-202ENST00000389416 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PTPRN2-202ENST00000389416 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
PTPRN2-202ENST00000389416 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
PTPRN2-202ENST00000389416 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
PTPRN2-202ENST00000389416 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
PTPRN2-202ENST00000389416 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
PTPRN2-202ENST00000389416 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
PTPRN2-202ENST00000389416 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
PTPRN2-202ENST00000389416 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
PTPRN2-202ENST00000389416 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
PTPRN2-202ENST00000389416 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms