RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
ALK-201ENST00000389048 LRP2P98164 4655 aa4.65□□□□□ -1.67
ALK-201ENST00000389048 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
ALK-201ENST00000389048 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
ALK-201ENST00000389048 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
ALK-201ENST00000389048 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.69
ALK-201ENST00000389048 KMT2CQ8NEZ4 4911 aaKnown RBP4.46□□□□□ -1.7
ALK-201ENST00000389048 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
ALK-201ENST00000389048 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
ALK-201ENST00000389048 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
ALK-201ENST00000389048 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.7
ALK-201ENST00000389048 EPPK1P58107 5090 aaKnown RBP4.4□□□□□ -1.71
ALK-201ENST00000389048 MUC17Q685J3 4493 aa4.38□□□□□ -1.71
ALK-201ENST00000389048 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
ALK-201ENST00000389048 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
ALK-201ENST00000389048 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
ALK-201ENST00000389048 MT1AP04731 61 aa4.3□□□□□ -1.72
ALK-201ENST00000389048 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
ALK-201ENST00000389048 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
ALK-201ENST00000389048 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
ALK-201ENST00000389048 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
ALK-201ENST00000389048 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
ALK-201ENST00000389048 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
ALK-201ENST00000389048 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
ALK-201ENST00000389048 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
ALK-201ENST00000389048 ABCA13Q86UQ4 5058 aa4.2□□□□□ -1.74
ALK-201ENST00000389048 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
ALK-201ENST00000389048 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
ALK-201ENST00000389048 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
ALK-201ENST00000389048 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
ALK-201ENST00000389048 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
ALK-201ENST00000389048 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
ALK-201ENST00000389048 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
ALK-201ENST00000389048 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
ALK-201ENST00000389048 MUC2Q02817 5179 aa4.04□□□□□ -1.76
ALK-201ENST00000389048 RNF213Q63HN8 5207 aa4.01□□□□□ -1.77
ALK-201ENST00000389048 LCE4AQ5TA78 99 aa4□□□□□ -1.77
ALK-201ENST00000389048 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
ALK-201ENST00000389048 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
ALK-201ENST00000389048 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
ALK-201ENST00000389048 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
ALK-201ENST00000389048 KMT2DO14686 5537 aa3.56□□□□□ -1.84
ALK-201ENST00000389048 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
ALK-201ENST00000389048 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
ALK-201ENST00000389048 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
ALK-201ENST00000389048 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
ALK-201ENST00000389048 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
ALK-201ENST00000389048 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
ALK-201ENST00000389048 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
ALK-201ENST00000389048 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
ALK-201ENST00000389048 USH2AO75445 5202 aa3.42□□□□□ -1.86
ALK-201ENST00000389048 NEBP20929 6669 aa3.39□□□□□ -1.87
ALK-201ENST00000389048 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
ALK-201ENST00000389048 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
ALK-201ENST00000389048 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
ALK-201ENST00000389048 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
ALK-201ENST00000389048 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
ALK-201ENST00000389048 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
ALK-201ENST00000389048 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
ALK-201ENST00000389048 MDN1Q9NU22 5596 aa2.96□□□□□ -1.94
ALK-201ENST00000389048 KRTAP5-3Q6L8H2 238 aa2.68□□□□□ -1.98
ALK-201ENST00000389048 PHGR1C9JFL3 82 aa2.54□□□□□ -2
ALK-201ENST00000389048 MUC5ACP98088 5654 aa2.54□□□□□ -2
ALK-201ENST00000389048 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
ALK-201ENST00000389048 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
ALK-201ENST00000389048 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
ALK-201ENST00000389048 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
ALK-201ENST00000389048 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
ALK-201ENST00000389048 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
ALK-201ENST00000389048 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.08
ALK-201ENST00000389048 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
ALK-201ENST00000389048 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
ALK-201ENST00000389048 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
ALK-201ENST00000389048 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
ALK-201ENST00000389048 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
ALK-201ENST00000389048 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
ALK-201ENST00000389048 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms