RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
MSR1-204ENST00000381998 KRTAP10-5P60370 271 aa2.55□□□□□ -2
MSR1-204ENST00000381998 TNP1P09430 55 aa2.54□□□□□ -2
MSR1-204ENST00000381998 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
MSR1-204ENST00000381998 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
MSR1-204ENST00000381998 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
MSR1-204ENST00000381998 MT1HP80294 61 aa2.5□□□□□ -2.01
MSR1-204ENST00000381998 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
MSR1-204ENST00000381998 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
MSR1-204ENST00000381998 M0R2T5 61 aa2.49□□□□□ -2.01
MSR1-204ENST00000381998 SPRR2GQ9BYE4 73 aa2.49□□□□□ -2.01
MSR1-204ENST00000381998 MT2AP02795 61 aa2.46□□□□□ -2.02
MSR1-204ENST00000381998 MT1FP04733 61 aa2.46□□□□□ -2.02
MSR1-204ENST00000381998 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
MSR1-204ENST00000381998 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
MSR1-204ENST00000381998 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
MSR1-204ENST00000381998 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
MSR1-204ENST00000381998 KRTAP19-8Q3LI54 63 aa2.39□□□□□ -2.03
MSR1-204ENST00000381998 MT1BP07438 61 aa2.37□□□□□ -2.03
MSR1-204ENST00000381998 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
MSR1-204ENST00000381998 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.04
MSR1-204ENST00000381998 MT1XP80297 61 aa2.34□□□□□ -2.04
MSR1-204ENST00000381998 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
MSR1-204ENST00000381998 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
MSR1-204ENST00000381998 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
MSR1-204ENST00000381998 USH2AO75445 5202 aa2.28□□□□□ -2.05
MSR1-204ENST00000381998 KMT2DO14686 5537 aa2.26□□□□□ -2.05
MSR1-204ENST00000381998 NEBP20929 6669 aa2.24□□□□□ -2.05
MSR1-204ENST00000381998 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
MSR1-204ENST00000381998 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
MSR1-204ENST00000381998 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
MSR1-204ENST00000381998 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
MSR1-204ENST00000381998 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
MSR1-204ENST00000381998 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.08
MSR1-204ENST00000381998 KRTAP2-3P0C7H8 128 aa2.05□□□□□ -2.08
MSR1-204ENST00000381998 KRTAP2-4Q9BYR9 128 aa2.05□□□□□ -2.08
MSR1-204ENST00000381998 KRTAP2-1Q9BYU5 128 aa2.05□□□□□ -2.08
MSR1-204ENST00000381998 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
MSR1-204ENST00000381998 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
MSR1-204ENST00000381998 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
MSR1-204ENST00000381998 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
MSR1-204ENST00000381998 MT1EP04732 61 aa2.03□□□□□ -2.09
MSR1-204ENST00000381998 FSIP2Q5CZC0 6907 aa2.02□□□□□ -2.09
MSR1-204ENST00000381998 MT1LQ93083 61 aa2.02□□□□□ -2.09
MSR1-204ENST00000381998 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
MSR1-204ENST00000381998 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
MSR1-204ENST00000381998 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
MSR1-204ENST00000381998 KRTAP20-1Q3LI63 56 aa1.94□□□□□ -2.1
MSR1-204ENST00000381998 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
MSR1-204ENST00000381998 MT1GP13640 62 aa1.9□□□□□ -2.1
MSR1-204ENST00000381998 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
MSR1-204ENST00000381998 MT1MQ8N339 61 aa1.89□□□□□ -2.11
MSR1-204ENST00000381998 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
MSR1-204ENST00000381998 SPRR2FQ96RM1 72 aa1.85□□□□□ -2.11
MSR1-204ENST00000381998 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
MSR1-204ENST00000381998 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
MSR1-204ENST00000381998 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
MSR1-204ENST00000381998 SYNE2Q8WXH0 6885 aaKnown RBP1.74□□□□□ -2.13
MSR1-204ENST00000381998 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
MSR1-204ENST00000381998 MT1AP04731 61 aa1.7□□□□□ -2.14
MSR1-204ENST00000381998 SPRR2EP22531 72 aa1.7□□□□□ -2.14
MSR1-204ENST00000381998 SPRR2BP35325 72 aa1.7□□□□□ -2.14
MSR1-204ENST00000381998 SPRR2AP35326 72 aa1.7□□□□□ -2.14
MSR1-204ENST00000381998 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
MSR1-204ENST00000381998 PRM1P04553 51 aa1.64□□□□□ -2.15
MSR1-204ENST00000381998 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
MSR1-204ENST00000381998 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
MSR1-204ENST00000381998 SPRR2DP22532 72 aa1.62□□□□□ -2.15
MSR1-204ENST00000381998 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
MSR1-204ENST00000381998 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
MSR1-204ENST00000381998 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.17
MSR1-204ENST00000381998 MT4P47944 62 aa1.43□□□□□ -2.18
MSR1-204ENST00000381998 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
MSR1-204ENST00000381998 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
MSR1-204ENST00000381998 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
MSR1-204ENST00000381998 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
MSR1-204ENST00000381998 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 92.5 ms