RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 MT1GP13640 62 aa4.3□□□□□ -1.72
DNMT3A-204ENST00000380756 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
DNMT3A-204ENST00000380756 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
DNMT3A-204ENST00000380756 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
DNMT3A-204ENST00000380756 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
DNMT3A-204ENST00000380756 MT1LQ93083 61 aa4.24□□□□□ -1.73
DNMT3A-204ENST00000380756 MT1EP04732 61 aa4.2□□□□□ -1.74
DNMT3A-204ENST00000380756 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
DNMT3A-204ENST00000380756 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
DNMT3A-204ENST00000380756 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.76
DNMT3A-204ENST00000380756 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
DNMT3A-204ENST00000380756 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
DNMT3A-204ENST00000380756 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
DNMT3A-204ENST00000380756 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
DNMT3A-204ENST00000380756 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
DNMT3A-204ENST00000380756 MT1MQ8N339 61 aa4.01□□□□□ -1.77
DNMT3A-204ENST00000380756 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
DNMT3A-204ENST00000380756 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
DNMT3A-204ENST00000380756 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
DNMT3A-204ENST00000380756 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
DNMT3A-204ENST00000380756 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
DNMT3A-204ENST00000380756 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
DNMT3A-204ENST00000380756 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
DNMT3A-204ENST00000380756 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
DNMT3A-204ENST00000380756 USH2AO75445 5202 aa3.94□□□□□ -1.78
DNMT3A-204ENST00000380756 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
DNMT3A-204ENST00000380756 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
DNMT3A-204ENST00000380756 KMT2DO14686 5537 aa3.86□□□□□ -1.79
DNMT3A-204ENST00000380756 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
DNMT3A-204ENST00000380756 MT4P47944 62 aa3.8□□□□□ -1.8
DNMT3A-204ENST00000380756 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
DNMT3A-204ENST00000380756 PRM1P04553 51 aa3.72□□□□□ -1.81
DNMT3A-204ENST00000380756 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
DNMT3A-204ENST00000380756 MT1AP04731 61 aa3.7□□□□□ -1.82
DNMT3A-204ENST00000380756 MT3P25713 68 aa3.69□□□□□ -1.82
DNMT3A-204ENST00000380756 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
DNMT3A-204ENST00000380756 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
DNMT3A-204ENST00000380756 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
DNMT3A-204ENST00000380756 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
DNMT3A-204ENST00000380756 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
DNMT3A-204ENST00000380756 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
DNMT3A-204ENST00000380756 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
DNMT3A-204ENST00000380756 NEBP20929 6669 aa3.45□□□□□ -1.86
DNMT3A-204ENST00000380756 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
DNMT3A-204ENST00000380756 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
DNMT3A-204ENST00000380756 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
DNMT3A-204ENST00000380756 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
DNMT3A-204ENST00000380756 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
DNMT3A-204ENST00000380756 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
DNMT3A-204ENST00000380756 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.88
DNMT3A-204ENST00000380756 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
DNMT3A-204ENST00000380756 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
DNMT3A-204ENST00000380756 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.92
DNMT3A-204ENST00000380756 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
DNMT3A-204ENST00000380756 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
DNMT3A-204ENST00000380756 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
DNMT3A-204ENST00000380756 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
DNMT3A-204ENST00000380756 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
DNMT3A-204ENST00000380756 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
DNMT3A-204ENST00000380756 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
DNMT3A-204ENST00000380756 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
DNMT3A-204ENST00000380756 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
DNMT3A-204ENST00000380756 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
DNMT3A-204ENST00000380756 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
DNMT3A-204ENST00000380756 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
DNMT3A-204ENST00000380756 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
DNMT3A-204ENST00000380756 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
DNMT3A-204ENST00000380756 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
DNMT3A-204ENST00000380756 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
DNMT3A-204ENST00000380756 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
DNMT3A-204ENST00000380756 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
DNMT3A-204ENST00000380756 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
DNMT3A-204ENST00000380756 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
DNMT3A-204ENST00000380756 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.09
DNMT3A-204ENST00000380756 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
DNMT3A-204ENST00000380756 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
DNMT3A-204ENST00000380756 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
DNMT3A-204ENST00000380756 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 1216.6 ms