RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
UBL3-201ENST00000380680 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
UBL3-201ENST00000380680 USH2AO75445 5202 aa5.79□□□□□ -1.48
UBL3-201ENST00000380680 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
UBL3-201ENST00000380680 MT1MQ8N339 61 aa5.73□□□□□ -1.49
UBL3-201ENST00000380680 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
UBL3-201ENST00000380680 SPRR2DP22532 72 aa5.69□□□□□ -1.5
UBL3-201ENST00000380680 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
UBL3-201ENST00000380680 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
UBL3-201ENST00000380680 KMT2DO14686 5537 aa5.62□□□□□ -1.51
UBL3-201ENST00000380680 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
UBL3-201ENST00000380680 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
UBL3-201ENST00000380680 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
UBL3-201ENST00000380680 FCGBPQ9Y6R7 5405 aaPredicted RBP5.56□□□□□ -1.52
UBL3-201ENST00000380680 KRTAP9-6A8MVA2 160 aa5.52□□□□□ -1.53
UBL3-201ENST00000380680 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
UBL3-201ENST00000380680 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.55
UBL3-201ENST00000380680 KRTAP2-3P0C7H8 128 aa5.38□□□□□ -1.55
UBL3-201ENST00000380680 KRTAP2-4Q9BYR9 128 aa5.38□□□□□ -1.55
UBL3-201ENST00000380680 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
UBL3-201ENST00000380680 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
UBL3-201ENST00000380680 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
UBL3-201ENST00000380680 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
UBL3-201ENST00000380680 LCE5AQ5TCM9 118 aa5.24□□□□□ -1.57
UBL3-201ENST00000380680 MT1AP04731 61 aa5.2□□□□□ -1.58
UBL3-201ENST00000380680 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
UBL3-201ENST00000380680 MT3P25713 68 aa5.17□□□□□ -1.58
UBL3-201ENST00000380680 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
UBL3-201ENST00000380680 MT4P47944 62 aa5.11□□□□□ -1.59
UBL3-201ENST00000380680 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
UBL3-201ENST00000380680 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
UBL3-201ENST00000380680 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
UBL3-201ENST00000380680 PRM1P04553 51 aa4.98□□□□□ -1.61
UBL3-201ENST00000380680 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.61
UBL3-201ENST00000380680 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
UBL3-201ENST00000380680 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
UBL3-201ENST00000380680 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
UBL3-201ENST00000380680 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
UBL3-201ENST00000380680 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
UBL3-201ENST00000380680 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
UBL3-201ENST00000380680 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
UBL3-201ENST00000380680 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
UBL3-201ENST00000380680 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
UBL3-201ENST00000380680 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
UBL3-201ENST00000380680 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
UBL3-201ENST00000380680 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
UBL3-201ENST00000380680 NEBP20929 6669 aa4.37□□□□□ -1.71
UBL3-201ENST00000380680 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
UBL3-201ENST00000380680 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
UBL3-201ENST00000380680 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
UBL3-201ENST00000380680 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
UBL3-201ENST00000380680 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
UBL3-201ENST00000380680 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
UBL3-201ENST00000380680 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
UBL3-201ENST00000380680 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
UBL3-201ENST00000380680 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
UBL3-201ENST00000380680 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
UBL3-201ENST00000380680 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
UBL3-201ENST00000380680 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
UBL3-201ENST00000380680 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
UBL3-201ENST00000380680 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
UBL3-201ENST00000380680 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
UBL3-201ENST00000380680 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
UBL3-201ENST00000380680 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
UBL3-201ENST00000380680 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
UBL3-201ENST00000380680 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
UBL3-201ENST00000380680 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
UBL3-201ENST00000380680 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
UBL3-201ENST00000380680 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
UBL3-201ENST00000380680 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
UBL3-201ENST00000380680 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
UBL3-201ENST00000380680 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
UBL3-201ENST00000380680 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
UBL3-201ENST00000380680 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
UBL3-201ENST00000380680 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
UBL3-201ENST00000380680 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
UBL3-201ENST00000380680 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 70.8 ms