RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 MT1EP04732 61 aa4.98□□□□□ -1.61
TNFSF13-203ENST00000380535 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
TNFSF13-203ENST00000380535 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
TNFSF13-203ENST00000380535 MT1LQ93083 61 aa4.89□□□□□ -1.63
TNFSF13-203ENST00000380535 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
TNFSF13-203ENST00000380535 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
TNFSF13-203ENST00000380535 MT1GP13640 62 aa4.79□□□□□ -1.64
TNFSF13-203ENST00000380535 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
TNFSF13-203ENST00000380535 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
TNFSF13-203ENST00000380535 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
TNFSF13-203ENST00000380535 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
TNFSF13-203ENST00000380535 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
TNFSF13-203ENST00000380535 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
TNFSF13-203ENST00000380535 MT1MQ8N339 61 aa4.68□□□□□ -1.66
TNFSF13-203ENST00000380535 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
TNFSF13-203ENST00000380535 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
TNFSF13-203ENST00000380535 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
TNFSF13-203ENST00000380535 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
TNFSF13-203ENST00000380535 SPRR2EP22531 72 aa4.55□□□□□ -1.68
TNFSF13-203ENST00000380535 SPRR2BP35325 72 aa4.55□□□□□ -1.68
TNFSF13-203ENST00000380535 SPRR2AP35326 72 aa4.55□□□□□ -1.68
TNFSF13-203ENST00000380535 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
TNFSF13-203ENST00000380535 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
TNFSF13-203ENST00000380535 KRTAP2-1Q9BYU5 128 aa4.53□□□□□ -1.68
TNFSF13-203ENST00000380535 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
TNFSF13-203ENST00000380535 SPRR2DP22532 72 aa4.4□□□□□ -1.71
TNFSF13-203ENST00000380535 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
TNFSF13-203ENST00000380535 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
TNFSF13-203ENST00000380535 NEBP20929 6669 aa4.38□□□□□ -1.71
TNFSF13-203ENST00000380535 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TNFSF13-203ENST00000380535 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
TNFSF13-203ENST00000380535 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
TNFSF13-203ENST00000380535 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
TNFSF13-203ENST00000380535 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
TNFSF13-203ENST00000380535 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
TNFSF13-203ENST00000380535 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
TNFSF13-203ENST00000380535 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
TNFSF13-203ENST00000380535 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.73
TNFSF13-203ENST00000380535 MT1AP04731 61 aa4.2□□□□□ -1.74
TNFSF13-203ENST00000380535 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
TNFSF13-203ENST00000380535 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
TNFSF13-203ENST00000380535 MT3P25713 68 aa4.07□□□□□ -1.76
TNFSF13-203ENST00000380535 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
TNFSF13-203ENST00000380535 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
TNFSF13-203ENST00000380535 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
TNFSF13-203ENST00000380535 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
TNFSF13-203ENST00000380535 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
TNFSF13-203ENST00000380535 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
TNFSF13-203ENST00000380535 PRM1P04553 51 aa3.75□□□□□ -1.81
TNFSF13-203ENST00000380535 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
TNFSF13-203ENST00000380535 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
TNFSF13-203ENST00000380535 MT4P47944 62 aa3.74□□□□□ -1.81
TNFSF13-203ENST00000380535 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
TNFSF13-203ENST00000380535 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
TNFSF13-203ENST00000380535 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
TNFSF13-203ENST00000380535 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.82
TNFSF13-203ENST00000380535 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
TNFSF13-203ENST00000380535 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
TNFSF13-203ENST00000380535 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
TNFSF13-203ENST00000380535 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
TNFSF13-203ENST00000380535 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
TNFSF13-203ENST00000380535 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TNFSF13-203ENST00000380535 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
TNFSF13-203ENST00000380535 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TNFSF13-203ENST00000380535 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
TNFSF13-203ENST00000380535 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
TNFSF13-203ENST00000380535 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
TNFSF13-203ENST00000380535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.94
TNFSF13-203ENST00000380535 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
TNFSF13-203ENST00000380535 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
TNFSF13-203ENST00000380535 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
TNFSF13-203ENST00000380535 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
TNFSF13-203ENST00000380535 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
TNFSF13-203ENST00000380535 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
TNFSF13-203ENST00000380535 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
TNFSF13-203ENST00000380535 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
TNFSF13-203ENST00000380535 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 91.1 ms