RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
VPS16-203ENST00000380469 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
VPS16-203ENST00000380469 MT1GP13640 62 aa5.29□□□□□ -1.56
VPS16-203ENST00000380469 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
VPS16-203ENST00000380469 MT1MQ8N339 61 aa5.28□□□□□ -1.56
VPS16-203ENST00000380469 FSIP2Q5CZC0 6907 aa5.25□□□□□ -1.57
VPS16-203ENST00000380469 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
VPS16-203ENST00000380469 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
VPS16-203ENST00000380469 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.59
VPS16-203ENST00000380469 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
VPS16-203ENST00000380469 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
VPS16-203ENST00000380469 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
VPS16-203ENST00000380469 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
VPS16-203ENST00000380469 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
VPS16-203ENST00000380469 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
VPS16-203ENST00000380469 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
VPS16-203ENST00000380469 MT1AP04731 61 aa4.79□□□□□ -1.64
VPS16-203ENST00000380469 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
VPS16-203ENST00000380469 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
VPS16-203ENST00000380469 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
VPS16-203ENST00000380469 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
VPS16-203ENST00000380469 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
VPS16-203ENST00000380469 MDN1Q9NU22 5596 aa4.68□□□□□ -1.66
VPS16-203ENST00000380469 KRTAP5-5Q701N2 237 aaPredicted RBP4.64□□□□□ -1.67
VPS16-203ENST00000380469 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
VPS16-203ENST00000380469 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
VPS16-203ENST00000380469 SPRR2EP22531 72 aa4.62□□□□□ -1.67
VPS16-203ENST00000380469 SPRR2BP35325 72 aa4.62□□□□□ -1.67
VPS16-203ENST00000380469 SPRR2AP35326 72 aa4.62□□□□□ -1.67
VPS16-203ENST00000380469 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
VPS16-203ENST00000380469 LCE3EQ5T5B0 92 aa4.58□□□□□ -1.68
VPS16-203ENST00000380469 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
VPS16-203ENST00000380469 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
VPS16-203ENST00000380469 SPRR2DP22532 72 aa4.43□□□□□ -1.7
VPS16-203ENST00000380469 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
VPS16-203ENST00000380469 PRM1P04553 51 aa4.37□□□□□ -1.71
VPS16-203ENST00000380469 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
VPS16-203ENST00000380469 MT3P25713 68 aa4.29□□□□□ -1.72
VPS16-203ENST00000380469 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
VPS16-203ENST00000380469 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
VPS16-203ENST00000380469 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
VPS16-203ENST00000380469 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
VPS16-203ENST00000380469 MT4P47944 62 aa3.88□□□□□ -1.79
VPS16-203ENST00000380469 NEBP20929 6669 aa3.87□□□□□ -1.79
VPS16-203ENST00000380469 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
VPS16-203ENST00000380469 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
VPS16-203ENST00000380469 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
VPS16-203ENST00000380469 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
VPS16-203ENST00000380469 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
VPS16-203ENST00000380469 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
VPS16-203ENST00000380469 LCE1DQ5T752 114 aa3.63□□□□□ -1.83
VPS16-203ENST00000380469 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
VPS16-203ENST00000380469 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
VPS16-203ENST00000380469 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
VPS16-203ENST00000380469 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
VPS16-203ENST00000380469 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
VPS16-203ENST00000380469 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
VPS16-203ENST00000380469 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
VPS16-203ENST00000380469 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
VPS16-203ENST00000380469 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
VPS16-203ENST00000380469 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
VPS16-203ENST00000380469 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
VPS16-203ENST00000380469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
VPS16-203ENST00000380469 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
VPS16-203ENST00000380469 KRTAP5-8O75690 187 aa3□□□□□ -1.93
VPS16-203ENST00000380469 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
VPS16-203ENST00000380469 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
VPS16-203ENST00000380469 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
VPS16-203ENST00000380469 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
VPS16-203ENST00000380469 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
VPS16-203ENST00000380469 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
VPS16-203ENST00000380469 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
VPS16-203ENST00000380469 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
VPS16-203ENST00000380469 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
VPS16-203ENST00000380469 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
VPS16-203ENST00000380469 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
VPS16-203ENST00000380469 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 120.7 ms