RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
RPP40-202ENST00000380051 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
RPP40-202ENST00000380051 KMT2DO14686 5537 aa5.76□□□□□ -1.49
RPP40-202ENST00000380051 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
RPP40-202ENST00000380051 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
RPP40-202ENST00000380051 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
RPP40-202ENST00000380051 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
RPP40-202ENST00000380051 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
RPP40-202ENST00000380051 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
RPP40-202ENST00000380051 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
RPP40-202ENST00000380051 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
RPP40-202ENST00000380051 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.61□□□□□ -1.51
RPP40-202ENST00000380051 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
RPP40-202ENST00000380051 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
RPP40-202ENST00000380051 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
RPP40-202ENST00000380051 MT1EP04732 61 aa5.53□□□□□ -1.52
RPP40-202ENST00000380051 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
RPP40-202ENST00000380051 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
RPP40-202ENST00000380051 SPRR2EP22531 72 aa5.42□□□□□ -1.54
RPP40-202ENST00000380051 SPRR2BP35325 72 aa5.42□□□□□ -1.54
RPP40-202ENST00000380051 SPRR2AP35326 72 aa5.42□□□□□ -1.54
RPP40-202ENST00000380051 KRTAP2-2Q9BYT5 123 aa5.41□□□□□ -1.54
RPP40-202ENST00000380051 NEBP20929 6669 aa5.41□□□□□ -1.54
RPP40-202ENST00000380051 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
RPP40-202ENST00000380051 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
RPP40-202ENST00000380051 MT1LQ93083 61 aa5.38□□□□□ -1.55
RPP40-202ENST00000380051 MT1GP13640 62 aa5.33□□□□□ -1.56
RPP40-202ENST00000380051 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
RPP40-202ENST00000380051 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
RPP40-202ENST00000380051 SPRR2DP22532 72 aa5.23□□□□□ -1.57
RPP40-202ENST00000380051 MT1MQ8N339 61 aa5.23□□□□□ -1.57
RPP40-202ENST00000380051 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
RPP40-202ENST00000380051 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
RPP40-202ENST00000380051 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
RPP40-202ENST00000380051 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
RPP40-202ENST00000380051 MT3P25713 68 aa5.05□□□□□ -1.6
RPP40-202ENST00000380051 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
RPP40-202ENST00000380051 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
RPP40-202ENST00000380051 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.62
RPP40-202ENST00000380051 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
RPP40-202ENST00000380051 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
RPP40-202ENST00000380051 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
RPP40-202ENST00000380051 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
RPP40-202ENST00000380051 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
RPP40-202ENST00000380051 MT1AP04731 61 aa4.59□□□□□ -1.67
RPP40-202ENST00000380051 LUZP6Q538Z0 58 aa4.59□□□□□ -1.67
RPP40-202ENST00000380051 MT4P47944 62 aa4.52□□□□□ -1.69
RPP40-202ENST00000380051 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
RPP40-202ENST00000380051 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
RPP40-202ENST00000380051 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
RPP40-202ENST00000380051 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
RPP40-202ENST00000380051 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
RPP40-202ENST00000380051 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
RPP40-202ENST00000380051 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
RPP40-202ENST00000380051 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
RPP40-202ENST00000380051 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
RPP40-202ENST00000380051 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
RPP40-202ENST00000380051 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
RPP40-202ENST00000380051 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
RPP40-202ENST00000380051 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
RPP40-202ENST00000380051 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
RPP40-202ENST00000380051 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
RPP40-202ENST00000380051 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
RPP40-202ENST00000380051 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
RPP40-202ENST00000380051 LCE3EQ5T5B0 92 aa3.71□□□□□ -1.82
RPP40-202ENST00000380051 INE1O15225 51 aa3.61□□□□□ -1.83
RPP40-202ENST00000380051 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
RPP40-202ENST00000380051 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
RPP40-202ENST00000380051 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
RPP40-202ENST00000380051 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
RPP40-202ENST00000380051 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
RPP40-202ENST00000380051 PRM1P04553 51 aa3.09□□□□□ -1.92
RPP40-202ENST00000380051 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
RPP40-202ENST00000380051 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
RPP40-202ENST00000380051 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
RPP40-202ENST00000380051 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
RPP40-202ENST00000380051 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms