RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 KRTAP19-3Q7Z4W3 81 aa8.42□□□□□ -1.06
NDEL1-202ENST00000380025 MT1GP13640 62 aa8.35□□□□□ -1.07
NDEL1-202ENST00000380025 MT1MQ8N339 61 aa8.34□□□□□ -1.07
NDEL1-202ENST00000380025 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
NDEL1-202ENST00000380025 SPRR2FQ96RM1 72 aa8.33□□□□□ -1.08
NDEL1-202ENST00000380025 KRTAP4-3Q9BYR4 195 aa8.32□□□□□ -1.08
NDEL1-202ENST00000380025 CRCT1Q9UGL9 99 aa8.25□□□□□ -1.09
NDEL1-202ENST00000380025 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.09
NDEL1-202ENST00000380025 KRTAP2-3P0C7H8 128 aa8.16□□□□□ -1.1
NDEL1-202ENST00000380025 KRTAP2-4Q9BYR9 128 aa8.16□□□□□ -1.1
NDEL1-202ENST00000380025 KRTAP2-1Q9BYU5 128 aa8.16□□□□□ -1.1
NDEL1-202ENST00000380025 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
NDEL1-202ENST00000380025 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
NDEL1-202ENST00000380025 KRTAP5-9P26371 169 aa8.01□□□□□ -1.13
NDEL1-202ENST00000380025 INE1O15225 51 aa7.97□□□□□ -1.13
NDEL1-202ENST00000380025 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
NDEL1-202ENST00000380025 LCE1AQ5T7P2 110 aa7.89□□□□□ -1.15
NDEL1-202ENST00000380025 MDN1Q9NU22 5596 aa7.86□□□□□ -1.15
NDEL1-202ENST00000380025 DSTQ03001 7570 aaKnown RBP7.86□□□□□ -1.15
NDEL1-202ENST00000380025 SPRR2EP22531 72 aa7.73□□□□□ -1.17
NDEL1-202ENST00000380025 SPRR2BP35325 72 aa7.73□□□□□ -1.17
NDEL1-202ENST00000380025 SPRR2AP35326 72 aa7.73□□□□□ -1.17
NDEL1-202ENST00000380025 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
NDEL1-202ENST00000380025 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
NDEL1-202ENST00000380025 KRTAP5-5Q701N2 237 aaPredicted RBP7.47□□□□□ -1.21
NDEL1-202ENST00000380025 KRTAP6-1Q3LI64 71 aa7.45□□□□□ -1.22
NDEL1-202ENST00000380025 MT1AP04731 61 aa7.43□□□□□ -1.22
NDEL1-202ENST00000380025 SPRR2DP22532 72 aa7.42□□□□□ -1.22
NDEL1-202ENST00000380025 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
NDEL1-202ENST00000380025 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
NDEL1-202ENST00000380025 SYNE1Q8NF91 8797 aaKnown RBP7.13□□□□□ -1.27
NDEL1-202ENST00000380025 KRTAP9-7A8MTY7 169 aa7.09□□□□□ -1.27
NDEL1-202ENST00000380025 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
NDEL1-202ENST00000380025 KRTAP9-4Q9BYQ2 154 aa7.02□□□□□ -1.29
NDEL1-202ENST00000380025 NEBP20929 6669 aa7□□□□□ -1.29
NDEL1-202ENST00000380025 LCE3DQ9BYE3 92 aa6.84□□□□□ -1.31
NDEL1-202ENST00000380025 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
NDEL1-202ENST00000380025 KRTAP6-2Q3LI66 62 aa6.76□□□□□ -1.33
NDEL1-202ENST00000380025 LCE3EQ5T5B0 92 aa6.71□□□□□ -1.34
NDEL1-202ENST00000380025 MT3P25713 68 aa6.68□□□□□ -1.34
NDEL1-202ENST00000380025 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.36
NDEL1-202ENST00000380025 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
NDEL1-202ENST00000380025 MT4P47944 62 aa6.49□□□□□ -1.37
NDEL1-202ENST00000380025 KRTAP2-2Q9BYT5 123 aa6.4□□□□□ -1.38
NDEL1-202ENST00000380025 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
NDEL1-202ENST00000380025 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
NDEL1-202ENST00000380025 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
NDEL1-202ENST00000380025 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
NDEL1-202ENST00000380025 HMCN1Q96RW7 5635 aa6.25□□□□□ -1.41
NDEL1-202ENST00000380025 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.41
NDEL1-202ENST00000380025 PRM1P04553 51 aa6.17□□□□□ -1.42
NDEL1-202ENST00000380025 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
NDEL1-202ENST00000380025 LCE1EQ5T753 118 aa5.65□□□□□ -1.51
NDEL1-202ENST00000380025 MUC5ACP98088 5654 aa5.52□□□□□ -1.52
NDEL1-202ENST00000380025 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
NDEL1-202ENST00000380025 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
NDEL1-202ENST00000380025 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
NDEL1-202ENST00000380025 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
NDEL1-202ENST00000380025 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
NDEL1-202ENST00000380025 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
NDEL1-202ENST00000380025 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
NDEL1-202ENST00000380025 AHNAK2Q8IVF2 5795 aa5.21□□□□□ -1.58
NDEL1-202ENST00000380025 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
NDEL1-202ENST00000380025 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
NDEL1-202ENST00000380025 KRTAP5-6Q6L8G9 129 aaPredicted RBP5□□□□□ -1.61
NDEL1-202ENST00000380025 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
NDEL1-202ENST00000380025 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
NDEL1-202ENST00000380025 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
NDEL1-202ENST00000380025 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
NDEL1-202ENST00000380025 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
NDEL1-202ENST00000380025 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
NDEL1-202ENST00000380025 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
NDEL1-202ENST00000380025 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
NDEL1-202ENST00000380025 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
NDEL1-202ENST00000380025 KRTAP21-1Q3LI58 79 aa3.85□□□□□ -1.79
NDEL1-202ENST00000380025 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
NDEL1-202ENST00000380025 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms