RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
APTX-204ENST00000379817 USH2AO75445 5202 aa4.11□□□□□ -1.75
APTX-204ENST00000379817 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
APTX-204ENST00000379817 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
APTX-204ENST00000379817 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
APTX-204ENST00000379817 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
APTX-204ENST00000379817 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
APTX-204ENST00000379817 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
APTX-204ENST00000379817 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
APTX-204ENST00000379817 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
APTX-204ENST00000379817 NEBP20929 6669 aa3.94□□□□□ -1.78
APTX-204ENST00000379817 INE1O15225 51 aa3.92□□□□□ -1.78
APTX-204ENST00000379817 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
APTX-204ENST00000379817 KMT2DO14686 5537 aa3.84□□□□□ -1.8
APTX-204ENST00000379817 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
APTX-204ENST00000379817 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
APTX-204ENST00000379817 MT1EP04732 61 aa3.74□□□□□ -1.81
APTX-204ENST00000379817 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
APTX-204ENST00000379817 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
APTX-204ENST00000379817 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
APTX-204ENST00000379817 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
APTX-204ENST00000379817 MT1LQ93083 61 aa3.68□□□□□ -1.82
APTX-204ENST00000379817 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
APTX-204ENST00000379817 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
APTX-204ENST00000379817 SPRR2FQ96RM1 72 aa3.59□□□□□ -1.84
APTX-204ENST00000379817 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
APTX-204ENST00000379817 MT1GP13640 62 aa3.56□□□□□ -1.84
APTX-204ENST00000379817 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
APTX-204ENST00000379817 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
APTX-204ENST00000379817 MT1MQ8N339 61 aa3.51□□□□□ -1.85
APTX-204ENST00000379817 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
APTX-204ENST00000379817 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
APTX-204ENST00000379817 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
APTX-204ENST00000379817 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
APTX-204ENST00000379817 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
APTX-204ENST00000379817 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
APTX-204ENST00000379817 SPRR2EP22531 72 aa3.38□□□□□ -1.87
APTX-204ENST00000379817 SPRR2BP35325 72 aa3.38□□□□□ -1.87
APTX-204ENST00000379817 SPRR2AP35326 72 aa3.38□□□□□ -1.87
APTX-204ENST00000379817 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
APTX-204ENST00000379817 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
APTX-204ENST00000379817 KRTAP5-11Q6L8G4 156 aa3.26□□□□□ -1.89
APTX-204ENST00000379817 SPRR2DP22532 72 aa3.25□□□□□ -1.89
APTX-204ENST00000379817 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
APTX-204ENST00000379817 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
APTX-204ENST00000379817 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
APTX-204ENST00000379817 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
APTX-204ENST00000379817 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
APTX-204ENST00000379817 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
APTX-204ENST00000379817 MT1AP04731 61 aa3.13□□□□□ -1.91
APTX-204ENST00000379817 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
APTX-204ENST00000379817 MT3P25713 68 aa3.02□□□□□ -1.93
APTX-204ENST00000379817 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
APTX-204ENST00000379817 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
APTX-204ENST00000379817 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
APTX-204ENST00000379817 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
APTX-204ENST00000379817 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
APTX-204ENST00000379817 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
APTX-204ENST00000379817 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
APTX-204ENST00000379817 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.96
APTX-204ENST00000379817 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
APTX-204ENST00000379817 MT4P47944 62 aa2.82□□□□□ -1.96
APTX-204ENST00000379817 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
APTX-204ENST00000379817 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
APTX-204ENST00000379817 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
APTX-204ENST00000379817 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
APTX-204ENST00000379817 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
APTX-204ENST00000379817 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
APTX-204ENST00000379817 PRM1P04553 51 aa2.63□□□□□ -1.99
APTX-204ENST00000379817 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
APTX-204ENST00000379817 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
APTX-204ENST00000379817 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
APTX-204ENST00000379817 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
APTX-204ENST00000379817 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
APTX-204ENST00000379817 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
APTX-204ENST00000379817 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
APTX-204ENST00000379817 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 63.1 ms