RNA–Protein interactions for RNA: ENST00000379806.9

PDHA1-204, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene PDHA1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-204ENST00000379806 MT1LQ93083 61 aa3.88□□□□□ -1.79
PDHA1-204ENST00000379806 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
PDHA1-204ENST00000379806 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
PDHA1-204ENST00000379806 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
PDHA1-204ENST00000379806 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
PDHA1-204ENST00000379806 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
PDHA1-204ENST00000379806 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
PDHA1-204ENST00000379806 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
PDHA1-204ENST00000379806 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
PDHA1-204ENST00000379806 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
PDHA1-204ENST00000379806 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
PDHA1-204ENST00000379806 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
PDHA1-204ENST00000379806 MT1GP13640 62 aa3.72□□□□□ -1.81
PDHA1-204ENST00000379806 MDN1Q9NU22 5596 aa3.71□□□□□ -1.82
PDHA1-204ENST00000379806 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
PDHA1-204ENST00000379806 MT1MQ8N339 61 aa3.67□□□□□ -1.82
PDHA1-204ENST00000379806 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
PDHA1-204ENST00000379806 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
PDHA1-204ENST00000379806 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
PDHA1-204ENST00000379806 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
PDHA1-204ENST00000379806 LCE3BQ5TA77 95 aa3.45□□□□□ -1.86
PDHA1-204ENST00000379806 SPRR2EP22531 72 aa3.43□□□□□ -1.86
PDHA1-204ENST00000379806 SPRR2BP35325 72 aa3.43□□□□□ -1.86
PDHA1-204ENST00000379806 SPRR2AP35326 72 aa3.43□□□□□ -1.86
PDHA1-204ENST00000379806 PRM1P04553 51 aa3.41□□□□□ -1.86
PDHA1-204ENST00000379806 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
PDHA1-204ENST00000379806 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
PDHA1-204ENST00000379806 KRTAP9-6A0A140TA67 174 aa3.36□□□□□ -1.87
PDHA1-204ENST00000379806 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
PDHA1-204ENST00000379806 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
PDHA1-204ENST00000379806 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
PDHA1-204ENST00000379806 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
PDHA1-204ENST00000379806 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
PDHA1-204ENST00000379806 SPRR2DP22532 72 aa3.28□□□□□ -1.88
PDHA1-204ENST00000379806 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
PDHA1-204ENST00000379806 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
PDHA1-204ENST00000379806 MT1AP04731 61 aa3.24□□□□□ -1.89
PDHA1-204ENST00000379806 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
PDHA1-204ENST00000379806 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PDHA1-204ENST00000379806 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
PDHA1-204ENST00000379806 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.89
PDHA1-204ENST00000379806 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
PDHA1-204ENST00000379806 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.9
PDHA1-204ENST00000379806 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
PDHA1-204ENST00000379806 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
PDHA1-204ENST00000379806 MT4P47944 62 aa3.03□□□□□ -1.92
PDHA1-204ENST00000379806 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
PDHA1-204ENST00000379806 LCE1DQ5T752 114 aa3□□□□□ -1.93
PDHA1-204ENST00000379806 MT3P25713 68 aa2.96□□□□□ -1.94
PDHA1-204ENST00000379806 NEBP20929 6669 aa2.94□□□□□ -1.94
PDHA1-204ENST00000379806 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
PDHA1-204ENST00000379806 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
PDHA1-204ENST00000379806 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
PDHA1-204ENST00000379806 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
PDHA1-204ENST00000379806 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
PDHA1-204ENST00000379806 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PDHA1-204ENST00000379806 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
PDHA1-204ENST00000379806 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PDHA1-204ENST00000379806 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
PDHA1-204ENST00000379806 MUC5ACP98088 5654 aa2.55□□□□□ -2
PDHA1-204ENST00000379806 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
PDHA1-204ENST00000379806 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
PDHA1-204ENST00000379806 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
PDHA1-204ENST00000379806 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PDHA1-204ENST00000379806 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
PDHA1-204ENST00000379806 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
PDHA1-204ENST00000379806 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
PDHA1-204ENST00000379806 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
PDHA1-204ENST00000379806 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
PDHA1-204ENST00000379806 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
PDHA1-204ENST00000379806 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.09
PDHA1-204ENST00000379806 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
PDHA1-204ENST00000379806 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
PDHA1-204ENST00000379806 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
PDHA1-204ENST00000379806 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PDHA1-204ENST00000379806 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
PDHA1-204ENST00000379806 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms