RNA–Protein interactions for RNA: ENST00000379751.4

CENPB-201, Transcript of centromere protein B, humanhuman

APPRIS P1 BASIC

Gene CENPB, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPB-201ENST00000379751 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
CENPB-201ENST00000379751 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
CENPB-201ENST00000379751 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
CENPB-201ENST00000379751 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
CENPB-201ENST00000379751 MT1GP13640 62 aa7.23□□□□□ -1.25
CENPB-201ENST00000379751 KRTAP9-6A8MVA2 160 aa7.2□□□□□ -1.26
CENPB-201ENST00000379751 MT1MQ8N339 61 aa7.18□□□□□ -1.26
CENPB-201ENST00000379751 KRTAP4-3Q9BYR4 195 aa7.15□□□□□ -1.26
CENPB-201ENST00000379751 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
CENPB-201ENST00000379751 KRTAP5-9P26371 169 aa7.12□□□□□ -1.27
CENPB-201ENST00000379751 LCE5AQ5TCM9 118 aa7.12□□□□□ -1.27
CENPB-201ENST00000379751 INE1O15225 51 aa7.08□□□□□ -1.28
CENPB-201ENST00000379751 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CENPB-201ENST00000379751 MDN1Q9NU22 5596 aa7.04□□□□□ -1.28
CENPB-201ENST00000379751 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
CENPB-201ENST00000379751 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
CENPB-201ENST00000379751 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
CENPB-201ENST00000379751 SPRR2EP22531 72 aa6.95□□□□□ -1.3
CENPB-201ENST00000379751 SPRR2BP35325 72 aa6.95□□□□□ -1.3
CENPB-201ENST00000379751 SPRR2AP35326 72 aa6.95□□□□□ -1.3
CENPB-201ENST00000379751 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.31
CENPB-201ENST00000379751 SPRR2DP22532 72 aa6.68□□□□□ -1.34
CENPB-201ENST00000379751 KRTAP2-3P0C7H8 128 aa6.67□□□□□ -1.34
CENPB-201ENST00000379751 KRTAP2-4Q9BYR9 128 aa6.67□□□□□ -1.34
CENPB-201ENST00000379751 KRTAP2-1Q9BYU5 128 aa6.67□□□□□ -1.34
CENPB-201ENST00000379751 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
CENPB-201ENST00000379751 NEBP20929 6669 aa6.42□□□□□ -1.38
CENPB-201ENST00000379751 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
CENPB-201ENST00000379751 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
CENPB-201ENST00000379751 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
CENPB-201ENST00000379751 MT1AP04731 61 aa6.35□□□□□ -1.39
CENPB-201ENST00000379751 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
CENPB-201ENST00000379751 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
CENPB-201ENST00000379751 KRTAP4-9Q9BYQ8 210 aa6□□□□□ -1.45
CENPB-201ENST00000379751 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
CENPB-201ENST00000379751 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
CENPB-201ENST00000379751 OBSCNQ5VST9 7968 aa5.95□□□□□ -1.46
CENPB-201ENST00000379751 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
CENPB-201ENST00000379751 MT4P47944 62 aa5.86□□□□□ -1.47
CENPB-201ENST00000379751 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
CENPB-201ENST00000379751 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
CENPB-201ENST00000379751 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
CENPB-201ENST00000379751 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
CENPB-201ENST00000379751 MT3P25713 68 aa5.76□□□□□ -1.49
CENPB-201ENST00000379751 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
CENPB-201ENST00000379751 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
CENPB-201ENST00000379751 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
CENPB-201ENST00000379751 HMCN1Q96RW7 5635 aa5.61□□□□□ -1.51
CENPB-201ENST00000379751 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
CENPB-201ENST00000379751 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
CENPB-201ENST00000379751 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
CENPB-201ENST00000379751 PRM1P04553 51 aa5.36□□□□□ -1.55
CENPB-201ENST00000379751 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
CENPB-201ENST00000379751 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
CENPB-201ENST00000379751 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
CENPB-201ENST00000379751 LCE1BQ5T7P3 118 aa4.76□□□□□ -1.65
CENPB-201ENST00000379751 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
CENPB-201ENST00000379751 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
CENPB-201ENST00000379751 KRTAP5-8O75690 187 aa4.64□□□□□ -1.67
CENPB-201ENST00000379751 KRTAP5-10Q6L8G5 202 aa4.62□□□□□ -1.67
CENPB-201ENST00000379751 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
CENPB-201ENST00000379751 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
CENPB-201ENST00000379751 KRTAP5-7Q6L8G8 165 aa4.45□□□□□ -1.7
CENPB-201ENST00000379751 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
CENPB-201ENST00000379751 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
CENPB-201ENST00000379751 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CENPB-201ENST00000379751 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
CENPB-201ENST00000379751 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
CENPB-201ENST00000379751 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
CENPB-201ENST00000379751 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
CENPB-201ENST00000379751 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CENPB-201ENST00000379751 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
CENPB-201ENST00000379751 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
CENPB-201ENST00000379751 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
CENPB-201ENST00000379751 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
CENPB-201ENST00000379751 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
CENPB-201ENST00000379751 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 73.7 ms