RNA–Protein interactions for RNA: ENST00000379205.4

C4orf46-201, Transcript of chromosome 4 open reading frame 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4orf46, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-201ENST00000379205 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
C4orf46-201ENST00000379205 MT1GP13640 62 aa3.3□□□□□ -1.88
C4orf46-201ENST00000379205 KRTAP9-2Q9BYQ4 174 aa3.27□□□□□ -1.89
C4orf46-201ENST00000379205 MT1LQ93083 61 aa3.26□□□□□ -1.89
C4orf46-201ENST00000379205 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
C4orf46-201ENST00000379205 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
C4orf46-201ENST00000379205 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
C4orf46-201ENST00000379205 MT1EP04732 61 aa3.2□□□□□ -1.9
C4orf46-201ENST00000379205 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
C4orf46-201ENST00000379205 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
C4orf46-201ENST00000379205 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
C4orf46-201ENST00000379205 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
C4orf46-201ENST00000379205 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
C4orf46-201ENST00000379205 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
C4orf46-201ENST00000379205 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
C4orf46-201ENST00000379205 MT1MQ8N339 61 aa3.01□□□□□ -1.93
C4orf46-201ENST00000379205 PRM1P04553 51 aa2.97□□□□□ -1.93
C4orf46-201ENST00000379205 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
C4orf46-201ENST00000379205 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
C4orf46-201ENST00000379205 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
C4orf46-201ENST00000379205 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
C4orf46-201ENST00000379205 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
C4orf46-201ENST00000379205 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
C4orf46-201ENST00000379205 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
C4orf46-201ENST00000379205 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
C4orf46-201ENST00000379205 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
C4orf46-201ENST00000379205 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
C4orf46-201ENST00000379205 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
C4orf46-201ENST00000379205 SPRR2EP22531 72 aa2.82□□□□□ -1.96
C4orf46-201ENST00000379205 SPRR2BP35325 72 aa2.82□□□□□ -1.96
C4orf46-201ENST00000379205 SPRR2AP35326 72 aa2.82□□□□□ -1.96
C4orf46-201ENST00000379205 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
C4orf46-201ENST00000379205 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
C4orf46-201ENST00000379205 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
C4orf46-201ENST00000379205 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
C4orf46-201ENST00000379205 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
C4orf46-201ENST00000379205 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
C4orf46-201ENST00000379205 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
C4orf46-201ENST00000379205 MT1AP04731 61 aa2.7□□□□□ -1.98
C4orf46-201ENST00000379205 SPRR2DP22532 72 aa2.7□□□□□ -1.98
C4orf46-201ENST00000379205 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
C4orf46-201ENST00000379205 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
C4orf46-201ENST00000379205 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
C4orf46-201ENST00000379205 LCE1DQ5T752 114 aa2.65□□□□□ -1.99
C4orf46-201ENST00000379205 NEBP20929 6669 aa2.6□□□□□ -1.99
C4orf46-201ENST00000379205 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
C4orf46-201ENST00000379205 MT4P47944 62 aa2.51□□□□□ -2.01
C4orf46-201ENST00000379205 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
C4orf46-201ENST00000379205 MT3P25713 68 aa2.48□□□□□ -2.01
C4orf46-201ENST00000379205 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
C4orf46-201ENST00000379205 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
C4orf46-201ENST00000379205 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
C4orf46-201ENST00000379205 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.05
C4orf46-201ENST00000379205 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.05
C4orf46-201ENST00000379205 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
C4orf46-201ENST00000379205 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
C4orf46-201ENST00000379205 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
C4orf46-201ENST00000379205 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
C4orf46-201ENST00000379205 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
C4orf46-201ENST00000379205 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
C4orf46-201ENST00000379205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.09
C4orf46-201ENST00000379205 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
C4orf46-201ENST00000379205 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
C4orf46-201ENST00000379205 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
C4orf46-201ENST00000379205 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
C4orf46-201ENST00000379205 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
C4orf46-201ENST00000379205 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
C4orf46-201ENST00000379205 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
C4orf46-201ENST00000379205 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
C4orf46-201ENST00000379205 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
C4orf46-201ENST00000379205 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
C4orf46-201ENST00000379205 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms